Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1595 ATGACTCTGTTAAGTTCAACAATGGGAAGAAATCTCAGCCCGGTCGTGCGGCAAGAGCTCGCGAATCTTGACAAAGATGCAGATAGTCGCAAATCCGCCATGAAAGCCCTAAAGTCATATGTGAAAGATATGGATTTCAAGGCTGTTCCTGTGTTTCTTGCAAAAATTTCTGAGACAAAGGAAATTCCATTCACAATTTCACTGTATGAAGTTTTTGCTAGGGTTCATGGTGTCAAGATTGTTCCCTTGATAGACACCATCATGGGATCCATTGTTCAGACCCTAGGTTCAAGTGGAGGGTCTTTCTCTCTTCATCAGGCTTGCTCCAAGGTGGTACCAGCAATAGCAAAATATGGGATTGACCACTCAACCCCAGAAGAGAAGAAGAGGGGCATAATCCACTCTCTTTGCAAGCCTCTTTCTGATTCTCTTTCAAGTTCACAGGAGAGCCTAACTTCCGGTGCCGCGCTTTGCTTGAAGGCTCTGGTGGAATCTGATAACTGGAGGTTTGCGTCGGATGAAATGGTCAATAGGGTTTGCCAGAATGTGGCTGTGGCATTAGAGGGAAAATGTAAGAGCCAAACGAATGCACACATGGGCCTGGTTATGGCGCTGGCGAAGCGGAATGCTTTGATTGTTGAAGCCTATGCAAGGTTGTTCATACAATCTGGACTAAGAGTACTGAATGCCGGCCTTGCGGAGGGGAATTCTCAGAAACGGCTTTCAGCGATTCAGATGGTCAACTTCTTGATGAAATGTTTGGACCCCAGGAGCATATTCTCTGAGCTCGAATCGATAATTGAGGAGATGGAAAGGTGTCAATCTGATAAAATGGCATTTGTCAAAGGTGCTGCGTTTGAAGCCTTGCAAATTGCCAAGGAAATTGCAATTGGCAAGCCAAAGCATGTTAAAAGTCCTGCTTCTGTTACAGGGTCAAATTTAAGTAGGGAAGTGAATACCTCCTCTGGTGATGAAGATCATTCTCCTGCATCAGTTTCACCAGAATCACGCGCATTGGACTTTTTGCCTGGATATGAATCTGCTGTTGAGTCTCCCATCTCAACCAACTTAGACTATGAGCGAAGGAGTGTTAATAGGAAGCTTTGGAGCAATCAAAATGGAGTGGTTAATGTGTCTCTCAAGGACGGTTTGGCTTCAGCGGTGGGGCAAGAACGTGGTTTGTTAGAGCACTCTGTGAATCATGAGTTTTCTAATGGAAGGAGAGAATTAGCACAAGAGTTTTCTGGTTTCATGGACAGAAATCCTATGCATGGAGTATCCAGAAGTACCACCACAAGTCCCCAAAGGTCACGCACACAGATTAGTGTTGACAACATTGAAATATTCACTACCCCAAGGAAGCTCATTCACTCTCTTCAAGATTCAAATGACATGAATTTGGATTGCTCCGAGAAACAGAACAGAAGGCTCAGGAGTCTATCCTATGGCAACATTGACTGGAGCCGAACATCGAAATATGACCAGAACTGTTTCTCAGATCAGGTGAAGTGTGACTGTGGAGTGAATGAAAGCTTATGTGCTGATGTGGAGTTCCAAGGTAGCTCAGAGTCAGTGTCATCAACAAATGACCTTCCAGGAGATGCTGATGTGAAAACGCCTTCCAAGATGGTTCCTGAAAATGGAAATGCTATGCAATTACAAAATCATCACATGGGAAAAGCACTTCAAAAGACTACATTCAAATTGGTTTGTGGTCTTTCATTTACTCTTCTTGCAATAGCCGCTCCTTTAATCTGGATCAATAATCAGGATGAAGGCCACTATCTTGTCCCAACATAA 1800 0.44 MTLLSSTMGRNLSPVVRQELANLDKDADSRKSAMKALKSYVKDMDFKAVPVFLAKISETKEIPFTISLYEVFARVHGVKIVPLIDTIMGSIVQTLGSSGGSFSLHQACSKVVPAIAKYGIDHSTPEEKKRGIIHSLCKPLSDSLSSSQESLTSGAALCLKALVESDNWRFASDEMVNRVCQNVAVALEGKCKSQTNAHMGLVMALAKRNALIVEAYARLFIQSGLRVLNAGLAEGNSQKRLSAIQMVNFLMKCLDPRSIFSELESIIEEMERCQSDKMAFVKGAAFEALQIAKEIAIGKPKHVKSPASVTGSNLSREVNTSSGDEDHSPASVSPESRALDFLPGYESAVESPISTNLDYERRSVNRKLWSNQNGVVNVSLKDGLASAVGQERGLLEHSVNHEFSNGRRELAQEFSGFMDRNPMHGVSRSTTTSPQRSRTQISVDNIEIFTTPRKLIHSLQDSNDMNLDCSEKQNRRLRSLSYGNIDWSRTSKYDQNCFSDQVKCDCGVNESLCADVEFQGSSESVSSTNDLPGDADVKTPSKMVPENGNAMQLQNHHMGKALQKTTFKLVCGLSFTLLAIAAPLIWINNQDEGHYLVPT* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1595 599 MobiDBLite consensus disorder prediction 302 337 - -
Lja1g1595 599 Gene3D - 2 305 IPR011989 -
Lja1g1595 599 MobiDBLite consensus disorder prediction 306 329 - -
Lja1g1595 599 PANTHER GEMIN2 8 599 - -
Lja1g1595 599 PANTHER PROTEIN SINE1 8 599 - -
Lja1g1595 599 SUPERFAMILY ARM repeat 14 291 IPR016024 -
Lja1g1595 599 MobiDBLite consensus disorder prediction 418 438 - -
Lja1g1595 599 MobiDBLite consensus disorder prediction 424 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1595 Lja-Chr1 17279584 17283208 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1595 - - gmx:102659858 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1595 1 17279584 17283208 Lja1g1595 1 17279584 17283208 ECH