Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1593 ATGGCACCTGTTCCTCCTTCTGCTGACAAAGCTGCTGATTTGCTGCAGAATTTGTCCCTGGATACGAATCCAAAGACAACTGGAGTTGCTGAGCCTGCAAAGAAGAATGGGCCTGCTTTTTCCAATGGAACAGCTAAGGGGATGACCAAGCCATTGACTCCAAATCCAAGCTTCGTTCCTAATGGATATCCTTCTACAACATATTATTATGGAGGTTATGATGGGCAAAATGATTGGAATGTTTATTCCAGATATATGAACCTTGATGGAGGAATGGCTCAAGGTGTTTATGGGGATAGCTGCTCATATATGTACAATCAAGGTTATGGTTATACACCATATGGAGCATATGCACCGCCAAACGCCTCCTCACCCATCATTCAACATGATGGTCAGCAGCTTTATGGGCTGCAACAGTACCAGTATCCTAGTTCTTACTACAAATCTCCGGCTTCTGCTGATGTATCATTTGCGCCAAACAAAGTCAGTGTTCCACAAGGGGAAATACCAACAGCCGTTAATGCTGATCATATCCCTTCCTCAAATGTTATGAACAAAGGAAACTCTGTTAGCGTAGCTAATGGTGGTGATTGTGCAAATAAAAATGGCTTAAATGCAATTCTAACAAGTTCCCAGCACAACACTTTGAATGCAAATAATTCTTATCCGTCTGGCATGACGGCTTACGCTCCTTTGTCAGGATATCAGGGTCCAAGAATGAGTACTCAGGGTACACAGTCAGCTGTCCCTTCTGATGTCTCATTAGCTTCGGATAGACAGACCAAACATGGAGCCAAGGTTAACTTCTCTTCTCAAAGGAATCAAAGACATCCCCAGCCACTTCAGCAATTCACGAACTTGAATGGTTCTGGACATCCATCTGGAATGGACCTGGTTTCTGGATTCATGAACAGGATGTATCCAAGCAATGGGATATACAGCCATTATGGAAACACATATCGAACTGGTTCTCGTTTTGGATCTGCTGCATATGGATATAGAACAGGCTCTCTTGATTACAAGAGCAAAGCCACAGGAAATGGCTGTGTTCATGATTTTAAAAGAAATGGTTTCAGTGAGCTCAATAAGGGACCAAGAGCTGGCAAGAGTTCTGACAGTAGAAGCGTCCAAAGTCTTGGACCTGTCACATTATTACTCAAAGGACAGAATCTCCCAGTGAAAAGTGATAACAAAGAAGTGCCCGTGGTTCCCAATAAGGAACAGTACAACGGGGAAGATTTCTCTGATAATTACTCTGATGCAAAGTTTTTTGTCATCAAATCCTATAGTGAGGATGATATTCACAAAAGCATAAAATACAGCGTCTGGGCAAGCACCCCTAACGGCAACAAAAAGCTCGATGCAGCATATCAGGAAGCCAAGGAGAAGCCTGGTGGCTGTCCCATATTTTTGTTATTTTCGGTGAACACTAGTGGGCAATTTGTTGGTTTAGCCGAGATGGTAGGTCCTGTTGATTTTGGTAAGACTGTAGAATACTGGCAGCAGGACAGGTGGACTGGTTGCTTTTCTGTGAAGTGGCATTTCGTAAAGGATATCCCAAATAACGTGCTAAGGCACATAACCCTTGAGAACAATGAAAACAAACCTGTAACCAATAGTAGGGATACTCAGGAGGTTAAGTTTGAGAAAGGTATTCAAATTATCAAAATTTTCAAGGAGCATTCGAGCAAAACTAGCATATTGGATGATTTTGGGTTTTATGAGGCTCGTGAGAAAGCAACCCAGGAGAGGAAATCTAAGGAGCAGCAGTTCCCAAAACAGGTCAACAAGGCCAGTGACATAACAATTGGGACTGTTACACTACCAAAGTCTCTTGATGCAACCTTGACAAATGAATCAGCTACTGCAGATGCAGCAGAAGGAAGGGTGAATGCTGAGGAGCTGTTAGAGAGGAATGGATCCACCACAGTAGTTGAAGAGTCTGCTAAGAGCTGTTAA 1959 0.4293 MAPVPPSADKAADLLQNLSLDTNPKTTGVAEPAKKNGPAFSNGTAKGMTKPLTPNPSFVPNGYPSTTYYYGGYDGQNDWNVYSRYMNLDGGMAQGVYGDSCSYMYNQGYGYTPYGAYAPPNASSPIIQHDGQQLYGLQQYQYPSSYYKSPASADVSFAPNKVSVPQGEIPTAVNADHIPSSNVMNKGNSVSVANGGDCANKNGLNAILTSSQHNTLNANNSYPSGMTAYAPLSGYQGPRMSTQGTQSAVPSDVSLASDRQTKHGAKVNFSSQRNQRHPQPLQQFTNLNGSGHPSGMDLVSGFMNRMYPSNGIYSHYGNTYRTGSRFGSAAYGYRTGSLDYKSKATGNGCVHDFKRNGFSELNKGPRAGKSSDSRSVQSLGPVTLLLKGQNLPVKSDNKEVPVVPNKEQYNGEDFSDNYSDAKFFVIKSYSEDDIHKSIKYSVWASTPNGNKKLDAAYQEAKEKPGGCPIFLLFSVNTSGQFVGLAEMVGPVDFGKTVEYWQQDRWTGCFSVKWHFVKDIPNNVLRHITLENNENKPVTNSRDTQEVKFEKGIQIIKIFKEHSSKTSILDDFGFYEAREKATQERKSKEQQFPKQVNKASDITIGTVTLPKSLDATLTNESATADAAEGRVNAEELLERNGSTTVVEESAKSC* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1593 652 Gene3D ph1033 like domains 402 572 - -
Lja1g1593 652 MobiDBLite consensus disorder prediction 42 58 - -
Lja1g1593 652 MobiDBLite consensus disorder prediction 20 58 - -
Lja1g1593 652 Pfam YT521-B-like domain 421 559 IPR007275 GO:0003723
Lja1g1593 652 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 1 652 - -
Lja1g1593 652 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 652 IPR045168 -
Lja1g1593 652 ProSiteProfiles YTH domain profile. 421 558 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1593 Lja-Chr1 17265631 17270729 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1593 - K20102 gmx:100818027 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1593 1 17265631 17270729 Lja1g1593 1 17265631 17270729 ECH