Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1591 ATGAGACCCCCAAGAGGAGGTGGCCGCGGCGGCGGTTTCAGAGGTGGACGGGACGGCGGTGGTCGTTTCGGTGGCGGAGGTCGTGGTGGAGGTCGTTTCGGTGGCGGCGGAGGTCGTTTTGGTGGCGGAGGTCGTGGGTTCCGTGATGAAGGGCCACCCTCCGAAGTCGTAGAGGTCTCGACGTTTATGCATGCGTGTGAGGGAGATGCTGTGACGAAGCTTACAAATGAGAAAATTCCCTATTTCAATGCTCCTATATATCTGCAGAACATGACTCAGATTGGGAAAGTTGATGAAATATTTGGCCCCATCAATGAATCTTACTTCTCAGTTAAAATGATGGAAGGGATTGTTGCTACTTCTTATTCAGCGGGTGACAAGTTTTATATTGACCCGAGCAAGCTCTTGCCTCTTGCAAGATTTCTTCCACAACCAAAGGGATCAGCAAGCGCCGGTAGAGGCGGAGGACGTGGTGGAGGCAGAGGTGGCCGTGGAGGTGGTGGATTTCGTGGAAGGGGTGGCCCAAGGGGTGGGAGAGGTGGTCCTCCTAGAGGTGGTGGACGGGGTGGTGGTTTCAGAGGAAGAGGGAGATTTTAG 597 0.5427 MRPPRGGGRGGGFRGGRDGGGRFGGGGRGGGRFGGGGGRFGGGGRGFRDEGPPSEVVEVSTFMHACEGDAVTKLTNEKIPYFNAPIYLQNMTQIGKVDEIFGPINESYFSVKMMEGIVATSYSAGDKFYIDPSKLLPLARFLPQPKGSASAGRGGGRGGGRGGRGGGGFRGRGGPRGGRGGPPRGGGRGGGFRGRGRF* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1591 198 Pfam Gar1/Naf1 RNA binding region 56 142 IPR007504 GO:0001522|GO:0042254
Lja1g1591 198 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 1 197 - -
Lja1g1591 198 Gene3D Probable tRNA pseudouridine synthase domain 52 143 IPR038664 -
Lja1g1591 198 MobiDBLite consensus disorder prediction 1 53 - -
Lja1g1591 198 MobiDBLite consensus disorder prediction 145 198 - -
Lja1g1591 198 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 197 - -
Lja1g1591 198 SUPERFAMILY Translation proteins 57 131 IPR009000 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1591 K11128 - cit:102619891 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1591 1 17239306 17241378 Lja1g1591 1 17239306 17241378 ECH