Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1587 ATGTCAACTCTGAGCAATGCAACAAATATATTTTGGCAAGAATGTCAAATAGGAAATCCTGAAAGGCAGAAGCTACTTAACCAAAAGGGATGCGTTGTATGGATTACTGGACTTAGCGGATCAGGAAAAAGCACATTAGCATGCTCACTAAGCAGAGAACTGCACTCAAGGGGAAAGTTATCTTATGTCCTTGATGGAGATAACCTCCGACATGGACTGAACAAGGATCTTGGTTTTAAACCTGAGGACCGCACTGAAAATATTCGCAGAACTGGAGAGGTGGCAAAACTATTTGCCGATGCTGGTCTAATATGTGTCGCCAGTCTGATTTCTCCCTATAGAAGAGATCGGGACGTTTGCCGTGCCATGTTGTCTGATGCCAATTTTATTGAGGTATTCATGAACATGCCTCTGGAATTGTGTGAGGCACGAGATCCGAAAGGCCTCTATAAGCTTGCTCGTGCTGGAAAGATCAAAGGTTTTACTGGCATTGATGATCCTTATGAACCACCGTTAAACTGTGAGATAGAAATAAAGCAGGAAGGTGGAGTTTGTCCAACACCCAATGTGATGGCTGGCCAAGTAGCTTGTTACTTGGAGGAAAAAGGATTTCTTGAATGTTAG 624 0.4311 MSTLSNATNIFWQECQIGNPERQKLLNQKGCVVWITGLSGSGKSTLACSLSRELHSRGKLSYVLDGDNLRHGLNKDLGFKPEDRTENIRRTGEVAKLFADAGLICVASLISPYRRDRDVCRAMLSDANFIEVFMNMPLELCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEIEIKQEGGVCPTPNVMAGQVACYLEEKGFLEC* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1587 207 Hamap Adenylyl-sulfate kinase [cysC]. 28 203 IPR002891 GO:0000103|GO:0004020|GO:0005524
Lja1g1587 207 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 1 206 - -
Lja1g1587 207 CDD APSK 32 179 IPR002891 GO:0000103|GO:0004020|GO:0005524
Lja1g1587 207 Gene3D - 2 206 IPR027417 -
Lja1g1587 207 Pfam Adenylylsulphate kinase 29 181 - -
Lja1g1587 207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 201 IPR027417 -
Lja1g1587 207 TIGRFAM apsK: adenylyl-sulfate kinase 12 180 IPR002891 GO:0000103|GO:0004020|GO:0005524
Lja1g1587 207 PANTHER ADENYLYL-SULFATE KINASE 1, CHLOROPLASTIC 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1587 Lja-Chr1 17214958 17219477 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1587 K00860 - gmx:100793200 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1587 1 17214958 17219477 Lja1g1587 1 17214958 17219477 ECH