Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1585 ATGAAGACCATGGTGACGCCATTGATGAGGATCTCCCCATCTTTTCGCCAAAATGCCCATAAAGCCCTTCCCTTCTCTCCAACACGTCACTCTTCTTCACCAAACTCCTTCACCTTCATCTCCGCCATTCCCACTCTTTCCATTTCCATGGCCGCTTCTTCCCAATCCACCGCTCCGGCTGTGCCCTCTGGTGATGTTGGCATGAAAAAAGATGAAGTTTTTCAATTAATTCAAGCGCATCAGGAAAAAGCTGCTAGACTTCCACCGGTTGAACAAGTTCGAACTGTCCTTGATCATAGCCTACGCGGGGTGCTCTCAACATTCTCTAAGAAGTACGAGGGTTATCCATCAGGGTCTATGGTTGACTTCGCATGTGATGCAAATGGATGCCCAATATTAGCAGTGAGCGATTTGGCAGTTCATACCAAGGACTTAACTGCTAATCCTAAATGTTCATTGCTTGTGGCTAGAGATCCTGAAGATAGGACTGATTTAGTGATAACTTTACATGGTGATGCTGTCTCTGTACCTGAAAAAGATAAAGAAGCCGTTCGAGCTGCATATTTAGCAAGACATCCCAATGCATTTTGGGTTGACTTTGGAGACTTCCAATTTGTTCGCATTAAACCAAAGACTGTACGATTTGTGTCAGGTGTTGCCACAGCTTTATTAGGATCAGGAGAGTTTGATGGAGATGAGTATAAATCTGCAAAAGTTGATCCAGTCGCTCAGTTTTCCAAGCCAGTGGCGTCTCATATGAACAAAGACCATGGTGAAGATACAAAAGTGATTGTGCAGCACTGGACCTCAGTTCCGGTGGACTTTGCTGACATACTAGATTTGGATTGTCTTGGTTTCAATGTTAAGGCTGGTTATCAAGGAGATACTTTCAAGCTCCGTGTACCTTTCCCTCGACGTGCAGAAGATAGAAAGGATGTTAAGACTCTCATTGTTGAGATGCTCCAAGCTGCCAGGCCTCAAGGTGATTGA 990 0.4475 MKTMVTPLMRISPSFRQNAHKALPFSPTRHSSSPNSFTFISAIPTLSISMAASSQSTAPAVPSGDVGMKKDEVFQLIQAHQEKAARLPPVEQVRTVLDHSLRGVLSTFSKKYEGYPSGSMVDFACDANGCPILAVSDLAVHTKDLTANPKCSLLVARDPEDRTDLVITLHGDAVSVPEKDKEAVRAAYLARHPNAFWVDFGDFQFVRIKPKTVRFVSGVATALLGSGEFDGDEYKSAKVDPVAQFSKPVASHMNKDHGEDTKVIVQHWTSVPVDFADILDLDCLGFNVKAGYQGDTFKLRVPFPRRAEDRKDVKTLIVEMLQAARPQGD* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1585 329 Pfam Domain of unknown function (DUF2470) 247 320 IPR019595 -
Lja1g1585 329 Gene3D - 70 224 IPR012349 -
Lja1g1585 329 PANTHER CREG1 PROTEIN 26 326 - -
Lja1g1585 329 Gene3D - 239 328 IPR037119 -
Lja1g1585 329 SUPERFAMILY FMN-binding split barrel 91 325 - -
Lja1g1585 329 PANTHER OS07G0573800 PROTEIN 26 326 - -
Lja1g1585 329 Pfam Pyridoxamine 5'-phosphate oxidase 92 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1585 Lja-Chr1 17204934 17210213 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1585 - - lja:Lj1g3v3975170.1 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1585 1 17204934 17210213 Lja1g1585 1 17204934 17210213 ECH