Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1580 ATGGTGACCTCGCTTTTTCTCTTCTTCATCACTTGTCTCTCTTTTCTACAATCCTCGTCTGCCCCTTCTCCATCTTCTGCTTCCTTTCTGTTTGCTCTTCAATCTCAATGCTCCCTTGCCATCACCCCCAATCCTCCTCTTCAGGTGGATGGGAATTTCGTAGAAAGGGTTTTGTCTGGAAGGAAGAGAGTCGGTTACATTTCTATACTCTTTTATGCTTCCTGGTGCCCTTTTTCACGCAGAATGCTTTCTGAATTTGAAATCCTTAGTTCAATGTTTCCTCAAGTAGAGCATGTGGCACTTGAACAATCATCTGCTTTGCCAAGCTTATATTCGAAATATAGGATCCATAGCTTGCCTGCTATCTTACTGGTGAACCAGACATCTAGGGTGAGATATCTTGGTGCAAAAAATCTAAACTCCATCGTTGAATTTTACGAGAGAAACACAGGATTTCAGGCGAGGGATCATATTGATTCTGGTCATCTAAGCAGTTTGATGAGTGATGAACATTCAAATGTGTCATTCATGGGCTTCTCCCTGAAAGAATTGTCAAGCAGGGAACCTTACTTAGCAGTATCTATATTGTTTCTCTGTTTGAGGATCATTCTCTTTGTCTTTCCCGAGATTATGCCGCATCTCCAAGCCTTCTGGGATTCCTACGCTCCTCGTTTGAACTTGCAAATATTCGGCGAGACAAGCCAAGTGATTGGGCGTGTTCTTAATCTTATTGATGTCAGGAGTGTTTGGACCAAGCTAAGACTATGCAAAACCAGGAACTTTCATGAAAGGGCGAGGAGTGTACGGGTTTGGGCATCATCTCTGGCATCTGTTTCTCTGGGCAAGTCATCATCATCATCTGCTAGGTAA 870 0.431 MVTSLFLFFITCLSFLQSSSAPSPSSASFLFALQSQCSLAITPNPPLQVDGNFVERVLSGRKRVGYISILFYASWCPFSRRMLSEFEILSSMFPQVEHVALEQSSALPSLYSKYRIHSLPAILLVNQTSRVRYLGAKNLNSIVEFYERNTGFQARDHIDSGHLSSLMSDEHSNVSFMGFSLKELSSREPYLAVSILFLCLRIILFVFPEIMPHLQAFWDSYAPRLNLQIFGETSQVIGRVLNLIDVRSVWTKLRLCKTRNFHERARSVRVWASSLASVSLGKSSSSSAR* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1580 289 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 4 287 IPR044794 -
Lja1g1580 289 SUPERFAMILY Thioredoxin-like 42 149 IPR036249 -
Lja1g1580 289 Pfam Thioredoxin 52 146 IPR013766 -
Lja1g1580 289 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 4 287 - -
Lja1g1580 289 Gene3D Glutaredoxin 46 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1580 Lja-Chr1 17158935 17163155 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1580 - - gmx:100795848 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1580 1 17158935 17163155 Lja1g1580 1 17158935 17163155 ECH