Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1576 ATGGTTCGTCCTTCCATTTTCTACTACCACTCTCTGCGTCGCTCATTCAGGGGCTTTTTCTTCATCCCCACAACCTTAGCTCTCTTAACCTCTCTTCTCATTCTCTTCTATGTTTACTCTACCTCCAATATCTCCACCCATCATCATCATCATCATCACCAACACCAATCCTCTCTTCACTTCAAATCTCCATCTTCCTTTTCCACTGTCTCTTCTTCCAACCCCCACTTGACCCTTATCTTGCCCAACAACGCTTCTGATTCTAACAAGTCTCTGACTTCCCAATTGGGTGATGATGGCCGTGGACCACAAAGTCAACGGGGTCTTCCACCCCAATTCAGCTCAAAGGGTTCAGGAGAATTTGAGAATAACAACGACGTGTACCATGATAGAGATATCTTTTTGGAAGACTATAAGGAAATGAATAGGAGCTTTAAGATATATGTTTATCCTCACAGGGAAGATGATCCTTTTGCAAATGTGCTTTTACCTGTGGAGTCTGAACCTGGTGGCAATTATGCTAGTGAAAGTTACTTCAAGAAGGTACTCATGAAGAGCCATTTCATCACAAAAGACCCTGTAGAGGCAGATCTTTTCTTTCTACCTTTTTCCATAGCAAGATTGCGGCATGATCGTAGAGTTGGCGTGGGAGGCATCAAGGACTTCATCAGAGACTATATTCAGAATATTATCCACAAATATCCGTATTGGAATCGCACCGGTGGTGCTGACCACTTTTATGTAGCTTGTCATTCAATTGGAAGGTCTGCCATGGAGAAAGCACCTGACGTGACCTTTAATGCCATTCAAGTTGTGTGCTCGTCAAGTTATTTTCTAACTGGGTATATTGCTCATAAGGATACATGCCTACCACAGATTTGGCCAAGACAAGGAAATCCCCCGAACCTTATTTCATCAAAGAGGAAGCAGCTAGCTTTCTTTGCTGGAGGAGTTAATTCCCCAGTACGTGTAAAGCTTCTTGAGACCTGGAAAAACGATTCAGAAATCTTCGTTCACCATGGAAGACTCAAAACACCATACGCGGATGAGTTGTTAGGAAGCAAGTTCTGCCTTCATGTAAAAGGCTTTGAAGTGAACACGGCTCGTATTGGAGATTCTTTATATTATGGTTGTGTTCCAGTGATCATTGCCAACTACTATGACCTTCCATTTGCAGATGTTTTAAACTGGAAGAGCTTTTCAGTTATTGTCACCACATTAGATATACCATTGCTGAAAAAGATCCTGAAAGGTATCAGTTCTGATGAATATTTGATGTTACAAAGCAATGTTTTGAAAGTGAGGAAACACTTCCAATGGCATTCACCCCCGCATGATTTTGATGCATTTTACATGGTTATGTATGAATTATGGCTTAGAAGAAGTTCTGTAAAAAATTCATTTGGGGAGATTCTGTAA 1419 0.4137 MVRPSIFYYHSLRRSFRGFFFIPTTLALLTSLLILFYVYSTSNISTHHHHHHHQHQSSLHFKSPSSFSTVSSSNPHLTLILPNNASDSNKSLTSQLGDDGRGPQSQRGLPPQFSSKGSGEFENNNDVYHDRDIFLEDYKEMNRSFKIYVYPHREDDPFANVLLPVESEPGGNYASESYFKKVLMKSHFITKDPVEADLFFLPFSIARLRHDRRVGVGGIKDFIRDYIQNIIHKYPYWNRTGGADHFYVACHSIGRSAMEKAPDVTFNAIQVVCSSSYFLTGYIAHKDTCLPQIWPRQGNPPNLISSKRKQLAFFAGGVNSPVRVKLLETWKNDSEIFVHHGRLKTPYADELLGSKFCLHVKGFEVNTARIGDSLYYGCVPVIIANYYDLPFADVLNWKSFSVIVTTLDIPLLKKILKGISSDEYLMLQSNVLKVRKHFQWHSPPHDFDAFYMVMYELWLRRSSVKNSFGEIL* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1576 472 Pfam Exostosin family 142 417 IPR040911 -
Lja1g1576 472 PANTHER EXOSTOSIN-LIKE PROTEIN-RELATED 91 466 - -
Lja1g1576 472 MobiDBLite consensus disorder prediction 78 122 - -
Lja1g1576 472 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 91 466 IPR004263 GO:0006486|GO:0016757
Lja1g1576 472 MobiDBLite consensus disorder prediction 78 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1576 Lja-Chr1 17114140 17117438 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1576 - - gmx:100798319 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1576 1 17114140 17117438 Lja1g1576 1 17114140 17117438 ECH