Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1564 ATGTCTATACAACCTTCATCCACCTCGACCGTTGAGAGAGATGGACAATCCAAGAATTCCAGGAAACCCAAATATTCTAGATTCACCCAGCAAGAACTTCCTGCGTGGCAACCGATTCTAACACCAGGATGGGTTATTCTAATATTTACAGTTATAGGAGTCATCTTCATCCCTATTGGTCTTGCTTCATTATTTGCGTCGGAGCGTGTGGTGGAAGTTCCGTTCCGGTACGATGATCAATGCCTTCCACCTGCTTATAGAGACGATGCAGTGGCATACATTAAAGATGATAGCTCTAGCAAAACTTGCATAAAGAAATTGACTGTTAAGAATAAAATGAAAGCCCCTGTTTATGTCTATTATCAGCTTGACAACTTTTACCAGAACCATCGCCGATACGTTAAAAGTAGAAGTGACACTCAACTGAGGAGCAAGGCAGCTGAGTATGATGTAAGCTCATGTAGTCCCGAAGACTATACACCAAGCAACTTGGGTCATCAACCAATTGTTCCTTGTGGCCTTATTGCATGGAGTCTGTTCAATGACACATACAGGATTTCAAACAATAATAAGGATTTGGTGATCAACAAAAAGAACATAGCATGGAAGAGTGACCAAAAGGCCAAGTTCGGGTCGGATGTTTACCCAAAAAACTTTCAAGCTGGAGGTTTGATTGGGGGTGCTAAACTTAATCAGAGCATACCTTTGAGTGAACAAGAGGATCTCATTGTTTGGATGCGAACAGCAGCACTGCCCACTTTCAGAAAACTATATGGGAAGATTGAGAATGACCTTGAAGTTAATGACGAAATAACAATGGTAATAGAGAACAATTATAATACATACGAGTTTGGAGGAAAAAAGAGCCTGGTTCTCTCAACCACAACCTGGATTGGTGGAAGAAATCACTTCCTGGGAATTGCATACATTTTCATTGGGGGGATGTCCTTGTTATTTGCTATAGCTTTCCTTCTTATGTATGTGATGAAGCCAAGGCCTCTTGGGGATCCAACATATCTGTCTTGGAACAGAAATCCAGGAAGTTGGACCAGAATATTTCATCTTATGAATTGA 1074 0.4106 MSIQPSSTSTVERDGQSKNSRKPKYSRFTQQELPAWQPILTPGWVILIFTVIGVIFIPIGLASLFASERVVEVPFRYDDQCLPPAYRDDAVAYIKDDSSSKTCIKKLTVKNKMKAPVYVYYQLDNFYQNHRRYVKSRSDTQLRSKAAEYDVSSCSPEDYTPSNLGHQPIVPCGLIAWSLFNDTYRISNNNKDLVINKKNIAWKSDQKAKFGSDVYPKNFQAGGLIGGAKLNQSIPLSEQEDLIVWMRTAALPTFRKLYGKIENDLEVNDEITMVIENNYNTYEFGGKKSLVLSTTTWIGGRNHFLGIAYIFIGGMSLLFAIAFLLMYVMKPRPLGDPTYLSWNRNPGSWTRIFHLMN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1564 357 PIRSF Lem3/Cdc50 2 345 IPR005045 GO:0016020
Lja1g1564 357 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 64 332 IPR005045 GO:0016020
Lja1g1564 357 PANTHER CELL CYCLE CONTROL PROTEIN 50 16 348 IPR005045 GO:0016020
Lja1g1564 357 MobiDBLite consensus disorder prediction 1 26 - -
Lja1g1564 357 PANTHER ALA-INTERACTING SUBUNIT 16 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1564 Lja-Chr1 16986652 16990955 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1564 - - gmx:100779539 603.208