Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja1g1562 | ATGGAAGCCAAGCATGCACATAATCGGACTTATGAGGATTTTGATCCCGTGTTTAAGTGGCGTAGAGAAGAGACCCGTGACACCATTGAGCTTTATCTTCCAGCGTTTAAGAGAGAGCAAGTACGAATCAAGATCAATCATGTTGGTCTTTTGGTAATAAGTGGGGAGCATCATTTGAGTGGAACTAGATGGAGACGTTTCAAGAAAGAATTTGAAATACCAAAATACTGTAATGAAGATGCAGTTCATGGCAATTTCATGCAGAACATTCTTTCTGTGGTACTGCCAAAGAAAATTCCACTAATTCCTCAAGAGGATCATGAAACACCAATCCCCGAATTTGAACACGAGAAAGAGGAGGAGGAGGAGAAGGAGAAGGAGAAAGAGGCATATCAGAAAATGGGACATGGAGCCAGAGAAGTAGTAGCAGAAGAAACAGCTCGCTCAATAGACAACCAGTTAGCAGAAAATGATGTGGGGTTAACACTTGAAACTACTAGAGAGGTTGCCTTCAAATTCATGGTTGTGATCATTGTTATTTTGCTTATTGTGAGCTACCTAGCAGACATGAGCAAACGCATCATGGCTCAAGCTCAATCATATTTACAGAATTAA | 615 | 0.4081 | MEAKHAHNRTYEDFDPVFKWRREETRDTIELYLPAFKREQVRIKINHVGLLVISGEHHLSGTRWRRFKKEFEIPKYCNEDAVHGNFMQNILSVVLPKKIPLIPQEDHETPIPEFEHEKEEEEEKEKEKEAYQKMGHGAREVVAEETARSIDNQLAENDVGLTLETTREVAFKFMVVIIVILLIVSYLADMSKRIMAQAQSYLQN* | 205 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja1g1562 | 204 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 8 | 112 | IPR002068 | - | |
| Lja1g1562 | 204 | Coils | Coil | 114 | 134 | - | - | |
| Lja1g1562 | 204 | PANTHER | HEAT SHOCK PROTEIN 26 | 1 | 202 | IPR045045 | - | |
| Lja1g1562 | 204 | PANTHER | HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN | 1 | 202 | - | - | |
| Lja1g1562 | 204 | CDD | ACD_sHsps-like | 24 | 97 | - | - | |
| Lja1g1562 | 204 | Pfam | Hsp20/alpha crystallin family | 21 | 102 | IPR002068 | - | |
| Lja1g1562 | 204 | Gene3D | - | 2 | 133 | IPR008978 | - | |
| Lja1g1562 | 204 | SUPERFAMILY | HSP20-like chaperones | 8 | 99 | IPR008978 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja1g1562 | - | - | gmx:100527560 | 216.083 |