Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1559 ATGGCTCTTTCTCGTGCCCTCATCCTTGTTGCTCTCATAGCTTCTATCTTCTCGACCATGGCTGTGGCAGAAGATTTCATAGTTGGTGATCACAATGGTTGGACAACTTGGTTTGATTATAAAACTTGGACTGCAAACAAGGTCTTTCGTGTTGGCGACACACTGACATTCAAGTACTCTGCTTGGAAGGACAATGTGATCAGAGTGAATGGAAGTGACTTCATAAGCTGCTCTGTTCCAAAAACAGCACAAGTGTGGAATAGTGGACATGATACAATTTTGTTGACTAGCCCAGGGAGAAGATGGTACATTTCTGGTGCTGCTAATCACTGCAAATCTGGCCAAAAGCTGTTCATAAATGTGCTGCCACCACAAGGAACATGGTGGTCTCCAACACCTTCCCCCTTTGCTTCACGTTCACCATCACCATCATCAAAACCCATTGAAATAGTACTCACACCTGCACCTGCACCATCATCAAAACCCGTTGAAGTAGTACTCACACCTGCACCTGCACCTGCACCATGGACTCCTACTGGATGGAAGCCAAAGAATCTGTTCAAATTGTTTCAGTAA 576 0.4497 MALSRALILVALIASIFSTMAVAEDFIVGDHNGWTTWFDYKTWTANKVFRVGDTLTFKYSAWKDNVIRVNGSDFISCSVPKTAQVWNSGHDTILLTSPGRRWYISGAANHCKSGQKLFINVLPPQGTWWSPTPSPFASRSPSPSSKPIEIVLTPAPAPSSKPVEVVLTPAPAPAPWTPTGWKPKNLFKLFQ* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1559 191 PANTHER BLUE COPPER PROTEIN-LIKE 4 137 - -
Lja1g1559 191 Gene3D - 22 126 IPR008972 -
Lja1g1559 191 ProSiteProfiles Phytocyanin domain profile. 24 123 IPR003245 GO:0009055
Lja1g1559 191 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Lja1g1559 191 PANTHER BLUE COPPER PROTEIN 4 137 IPR039391 GO:0009055
Lja1g1559 191 CDD Phytocyanin 25 121 - -
Lja1g1559 191 SUPERFAMILY Cupredoxins 23 122 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1559 Lja-Chr1 16959132 16959817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1559 1 158 Miscellaneous Gene Families AT2G32300 36.025 7.22e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1559 - - mtr:MTR_7g086230 199.904