Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1557 ATGGAGGAACAAGCTGCTGGGAAATCACGCCGAGAGCGAAGGAAAGAGTCCCGCTTGGCGAAAAATGCATCAAAGCACCAATCTTGGCTCAACCACCAGAAATCTAGAGCTGCTATTAAAGGAGGAAACCATGATTCAGAGTTAAAAACTAAAAGTGAATTAGACCGGTCAGTTAGTCCAAATCCCCATGAAAAGCAAGTTGTGAAGTTGGAGTCTTTTTCTGGGAAACATGAGGCTGCTAAAGAATACAATGTGCCAGAGGAAATTTGTGGCTCTAAGAGGGCTAAGTTGAGTGTGATGGATGTTTCTGTAGATGACAATAAGGATATAGAATTGGAAAGAAAACTTTCCAAGAAGCTCAAGGTGAAGGAAGGAAAATTGAGAGGGATGGATGACGGGCTGAATGTGTTACTTGAAGGAATGTCGTCGTTTGCTGATTTAATGGGAGAAGGGGAGGATTCTGGTACCGATGAATTACCTGTGAAGCGGTTGAAGAAGAAGAGCTTGTCGAGTAAGAAGCATAAGTTGTCAAAGGAAAAGGTTGAAGCACAATTATTAGATGACGTAGCATCAGAAGTTCCTGACAGTGTACCTTCGAGGAAGAACCATAAGAAAAGAAAATCTCCAGATGAACTGCTGGAAGATGGCGTCGAGCATGGTGCTGGTGACATGTCCAAGCCTCCAGAATCCTGTGGGACGGAGGTGACATCACAGGTTGCTCCTGCTGAAGTTCTGGTGAAGAAAGCCAAAGAAAAATATATAGCACCTCACTTGAGAGCTCGCGCTGGCAATAAACCTGAAGAGCATACTCAAATTCGAAGACGTGTGCGCGGCCTTCTTAACAGGCTTTCTGAATCTAATGTTGAATCAATTACTGGAGAATTGTCCTTGATCTTTCAGTCTGTTGCTCGTAGTGTTGCATCTCGGATTACGATTGAAGAGATTTTAGCATCATGTTATAGTGGCCCCCGTGGCAATGAACAGTATGCTGCTGTGTTTGCTGCATTTGTTGCAGGAATGGCCTGTTTGGTTGGTATTGACTTCAGTGCAAAGTTTATGGCTTCCTTTGCTAAATGCTTTGAGGATGAGTACCATAAAGAAGACAATCTCTCTTTGCGGAATCTTACTCTTCTCCTATCCTATCTATGTATATTTGGAGTCTGTTCTAGTGATTTAATATATGACTTTCTAATAATGCTGAGCAAGCGGTTAGCTGAGATGGATGTTTCTATCATTTTGGCGGTGTTACAATGTTGTGGGATGAAAATAAGGGCTGATGATCCAACTTCCATGAAAAATTTCATTCTTAGTGTTCAGAATACGTCAAATAAGTTGAAGCCTTCCTCTGGAGATGACCATGAAAAGAAATACAGTAAAAGAATGGAGTTCATGCTTGAAACCATATGTGACATCAAGAACAACAAGAGCAGGGCAAAAGAGGACCCTGCACATCATACTCGGATTAAGAAGTGGTTACAGAAGATAAGAGCTGTTGACATTATGATTAGAGGGCTCAAATGGAGCAAGTTGCTTGATCCTGATAAGAAGGGCCAATGGTGGTTGTCTGGAGATGTAGCTTCTGCAGCCGATAATGTTGAAGAAGTTGCTGGCAGAATAGACAAAGATGTTCTTGAAACACAAAGAATGCTGGAGCTTGCTGCTGCTCAAAAGATGAACACTGATGCCAGAAGGGCAATCTTTTGTATTATAATGAGCGGGGAGGACTATCTTGATGCATTTGAGAAGCTTCTAAGATTGGAATTACCAGGCAAGCAGTGTTGCTTGCAAGAGAAAGTTTTTAACAAGTATTATACAGTGCTGGCTGTGAAGTTGTGCGAGCATGACAAAAATCATAAGTTCACTCTGCAGCGGCTGGAATCAATGCCACTTCTGAGGTCAATGCACCTTGCAAAGTTCGTGGCCGAAATGGTTTCCTCTTTCACTCTCTCCCTTGCAGCTTTGAAGACTGTGGATCTGAGTGATATCAGCCTGTTAACACCAAAAAGGATTATGCATTTCCGCATACTGTTTGAGGCCATTTTTGAGTATCCTGAGAGCTTGGTATGGAATATATTCACTCGTGCAGCTGTGACCCCTGAACTTGAAGGTCTTCGTCAAGGCATTGAGTTTTTCATTAAGGAGTACATTGTGAAAACTAATAAAGCTCTAACTCAAAAATTTAAGTTGGCAAGAAGAGCTCTTAATAATATGGAAGGGATTCTGATGTGA 2229 0.4204 MEEQAAGKSRRERRKESRLAKNASKHQSWLNHQKSRAAIKGGNHDSELKTKSELDRSVSPNPHEKQVVKLESFSGKHEAAKEYNVPEEICGSKRAKLSVMDVSVDDNKDIELERKLSKKLKVKEGKLRGMDDGLNVLLEGMSSFADLMGEGEDSGTDELPVKRLKKKSLSSKKHKLSKEKVEAQLLDDVASEVPDSVPSRKNHKKRKSPDELLEDGVEHGAGDMSKPPESCGTEVTSQVAPAEVLVKKAKEKYIAPHLRARAGNKPEEHTQIRRRVRGLLNRLSESNVESITGELSLIFQSVARSVASRITIEEILASCYSGPRGNEQYAAVFAAFVAGMACLVGIDFSAKFMASFAKCFEDEYHKEDNLSLRNLTLLLSYLCIFGVCSSDLIYDFLIMLSKRLAEMDVSIILAVLQCCGMKIRADDPTSMKNFILSVQNTSNKLKPSSGDDHEKKYSKRMEFMLETICDIKNNKSRAKEDPAHHTRIKKWLQKIRAVDIMIRGLKWSKLLDPDKKGQWWLSGDVASAADNVEEVAGRIDKDVLETQRMLELAAAQKMNTDARRAIFCIIMSGEDYLDAFEKLLRLELPGKQCCLQEKVFNKYYTVLAVKLCEHDKNHKFTLQRLESMPLLRSMHLAKFVAEMVSSFTLSLAALKTVDLSDISLLTPKRIMHFRILFEAIFEYPESLVWNIFTRAAVTPELEGLRQGIEFFIKEYIVKTNKALTQKFKLARRALNNMEGILM* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1557 742 MobiDBLite consensus disorder prediction 204 222 - -
Lja1g1557 742 MobiDBLite consensus disorder prediction 146 237 - -
Lja1g1557 742 PANTHER NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1 1 739 - -
Lja1g1557 742 MobiDBLite consensus disorder prediction 1 73 - -
Lja1g1557 742 Pfam MA3 domain 563 624 IPR003891 -
Lja1g1557 742 Gene3D - 240 520 - -
Lja1g1557 742 SUPERFAMILY ARM repeat 266 475 IPR016024 -
Lja1g1557 742 SMART if4_15 273 475 IPR003890 GO:0003723|GO:0005515
Lja1g1557 742 MobiDBLite consensus disorder prediction 38 62 - -
Lja1g1557 742 MobiDBLite consensus disorder prediction 1 22 - -
Lja1g1557 742 Pfam MIF4G domain 274 475 IPR003890 GO:0003723|GO:0005515
Lja1g1557 742 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 1 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1557 Lja-Chr1 16934821 16942537 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1557 K17583 - gmx:100778579 1055.05