Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1552 ATGGCGATGAAGCTCAAGTATCTCTCTTCCATTGCCGAGGACGTCGTCAAGAGATGTGCACAGAAACTGGACATTTCGGAAGAGACATTGGTGGGAGAATTTGAAAGGGGTTGGAACGCTGCTGATACAGGAAATTACTGCAAGGATTTAGTTGAATTTTGCAGTGGGAATGCTCTGAGTGAAATTTGCAAGAACGTAGAGGAAGAGATCAACAATGGTGAATTTAGCAGGTTGACCTATGACATGATGCTTGCATGGGAGAAACCTAGCTACTATGATGACGATGATCCAGCGGAGGCTGCAGCAAAGGAAAAAGAAGAAAGGAAGATAACTCTTAAGGCCACTCAAGAACAGGATGATATACCTCTGTTTTATTCAGACATCATGCCCCTCCTTGTGAATAATGATCCCAATGTTGGAGAAGATGCTTTTGTATGGTTGGGATCATTAGTTCCATTGGTAGCAGATGTAGCAAATGGAAGGTTTACGTTTGAAACTCTAACAGCACCAACCGGCCTCCGACTACACTTTCCAGCATATGACATGTTCTTGAAAGAAATGGACAAGTGCATAGGACATTTGCAGAAACAGGCAACACCAAATGGTGTGGAACTGGCTGATGATGAATTTATATTACATGTAGATGGAATCGCCAGTGCTCAGAGGGTAGTTCGCCATATTGGAACAACAAGTTGGCCTGGTAGGCTTACACTGACCAATTATGCTCTGTACTTTGAGGCTTCGGGAGTAATAAAGTATGATGATGCTCTCAAAATAGACCTCTCCAAAGACGTTGAACATAGTGTTAAACCAGTTGCTACAGGTCCATGGGGAGCTCAACTGTTTGACAAGGCCATAGTCTATGATTCAACTGATTTATCAGAGGGTATTGTACTGGAGTTTCCAGAGCTTACAAGTTCCACAAGACGTGACCATTGGCTTGCATTGATAAGGGAAATAATGTTTCTCCACCAGTTTTTATCAAGGTACAATATAAAATGCCCAGTACAATCATGGGAGATGCATGCAAGGACAATTTTGGGAATCGTAAGGCTGCATGCAGCAAGAGAAATGCTAAGAATATCACCTCCTGTCCCAACTAAATTCTTAATATTTTCCTTATATAATGAGATACCAAAAGGAGACTATGTTCTAGAAGAGCTTGCTCGAAGCCTAAAAAATGTCGATAGTGGACAGACATGTAGTGCAAGTTCTATCCTCAAGAGTATGAACATATCTAGGCCCGCGATTTCTGATTTAGTAGTAGAAGATGTAAGTCAAGCAGACAGCAATTTTAATGTTTTAGAGGAGAGTCCCTCCTTGGTGTCTGCTATCAAACAATCAAGGGAGGAAGAAAAGCAAGTTCTCATTGCTAAAGCTACCACTGAAGAGTTAAAGGAGGAAGGAGTCACTGACAGTGTTCTTGTTCTAACGGAACTGCTAAAGCCACTTAAAAATGTGGTTCCCTGGGTTAAAAAAATCTTCACATGGGAAAGGCCAATAGATACTCTTGCTGTTCTTGCTGCATCCTTGATAATCACCTACATGGAGTGGGTTGGAAAAGCAGCTGCAGCTTTCTTGATTTGGGTAATAGTAAAGATGCTTAAGGCAAGAGAACAAAAGATCAATGAGAAATGCAACGAGATAGTAATCAGCAGATCAAGTATGGCTTCTGATCAGTCTACAGTGGATAGCATCGTCTCAGCGCAGCAAGGACTGTACACTGTTCATGAGATGATGCAGATAGCAAACATAGCAATGCTGAAGATATGGTCAATCCTTATTTCAAAAGCTGATAAGCATGCAAATATAGTGATGGTGGCACTGGGCGTATTGGCGGTCTTATTGGCCGTGGTTCCGTTCAAAATCTTCATTATGGGTCTGATTGTGCAAAGCTTCACCATGTCACTCAAGATGGGCAAGTCTTCTGGACCAGGGAATAGAAGGTTGAAGGAATGGTGGGACTCCATTCCAGTTGTTCCTGTTCGTGTGGTAGACAATGATCCTAACACTGAATACACTAAATAG 2028 0.4206 MAMKLKYLSSIAEDVVKRCAQKLDISEETLVGEFERGWNAADTGNYCKDLVEFCSGNALSEICKNVEEEINNGEFSRLTYDMMLAWEKPSYYDDDDPAEAAAKEKEERKITLKATQEQDDIPLFYSDIMPLLVNNDPNVGEDAFVWLGSLVPLVADVANGRFTFETLTAPTGLRLHFPAYDMFLKEMDKCIGHLQKQATPNGVELADDEFILHVDGIASAQRVVRHIGTTSWPGRLTLTNYALYFEASGVIKYDDALKIDLSKDVEHSVKPVATGPWGAQLFDKAIVYDSTDLSEGIVLEFPELTSSTRRDHWLALIREIMFLHQFLSRYNIKCPVQSWEMHARTILGIVRLHAAREMLRISPPVPTKFLIFSLYNEIPKGDYVLEELARSLKNVDSGQTCSASSILKSMNISRPAISDLVVEDVSQADSNFNVLEESPSLVSAIKQSREEEKQVLIAKATTEELKEEGVTDSVLVLTELLKPLKNVVPWVKKIFTWERPIDTLAVLAASLIITYMEWVGKAAAAFLIWVIVKMLKAREQKINEKCNEIVISRSSMASDQSTVDSIVSAQQGLYTVHEMMQIANIAMLKIWSILISKADKHANIVMVALGVLAVLLAVVPFKIFIMGLIVQSFTMSLKMGKSSGPGNRRLKEWWDSIPVVPVRVVDNDPNTEYTK* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1552 675 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 3 667 - -
Lja1g1552 675 Pfam Plant protein of unknown function (DUF639) 441 666 IPR006927 -
Lja1g1552 675 PANTHER ARGH (DUF639) 3 667 - -
Lja1g1552 675 Coils Coil 98 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1552 Lja-Chr1 16831341 16836673 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1552 - - gmx:100783299 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1552 1 16831341 16836673 Lja1g1552 1 16831341 16836673 ECH