Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1549 ATGGGAATGGAAGCAAGTTTGGTTGATCCGGGTAGAGACAGAGTTGGACATGTTAACAAGGTTGGTTATGTGAGAAGGATCATTGCCAAGAGGAGGAAACCTTGTCGCAGCAGGGTTAAGAGGCCAGTGCTGGCAGTACCAAAGGCTCTTAAGGATCTGTTTGATTCATGCAGAGAAACATTCAAAGGCCCTGACACTGTTCCTTCACCACAAGATGTTCAGAAAATGTGCCACATCCTTGATGACATTAGGCCAGGCGATTTTGGGCTAAGTAGAGATCTGCAGTTCTTCAAGCCTGGAAATATCATCAAAGAGAACCAAAGGGTCACCTATACAACCGTGTACAAGTGTGCCAATTTCTCACTTTGCATATTTTTCATACCTGAAAAAGGAGTCATTCCACTCCATAACCATCCGGGTATGACCGTTTTCAGCAAACTTCTATTAGGACAAATGCACATTAAATCTTATGACTGGGTTGATCCTGAGGCCTCTGACAACTTGTTAGAGCAAACAACTAAATTGAGATTAGCAAAGTTAAAAGCTGATAATGTCTTCACAGCACCCTGTGATACTTCAGTGTTGTATCCAACAACAGGAGGGAATATCCATGAATTCACAGCCATAACTCCATGTGCTGTGCTTGATGTCATTGGTCCTCCTTATTCCAAAGAAGATGGAAGGGACTGTTCTTATTACAGAGATCACCCTTATGCTGCTTTTCCCAATGAAGAGATTTCTGAGGTGAAAGACAAAAATGATAGCTACGCGTGGTTGGAAGAAATTGAGATGCCAGAGAATTCTCAAATGGATGGGATTGAGTATCTGGGTCCTCCCATCACTGAGACAGCATTTTAG 858 0.4277 MGMEASLVDPGRDRVGHVNKVGYVRRIIAKRRKPCRSRVKRPVLAVPKALKDLFDSCRETFKGPDTVPSPQDVQKMCHILDDIRPGDFGLSRDLQFFKPGNIIKENQRVTYTTVYKCANFSLCIFFIPEKGVIPLHNHPGMTVFSKLLLGQMHIKSYDWVDPEASDNLLEQTTKLRLAKLKADNVFTAPCDTSVLYPTTGGNIHEFTAITPCAVLDVIGPPYSKEDGRDCSYYRDHPYAAFPNEEISEVKDKNDSYAWLEEIEMPENSQMDGIEYLGPPITETAF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1549 285 PANTHER UNCHARACTERIZED 40 282 IPR012864 GO:0016702
Lja1g1549 285 SUPERFAMILY RmlC-like cupins 47 237 IPR011051 -
Lja1g1549 285 CDD cupin_ADO 119 223 - -
Lja1g1549 285 Pfam PCO_ADO 79 280 IPR012864 GO:0016702
Lja1g1549 285 Gene3D Jelly Rolls 42 249 IPR014710 -
Lja1g1549 285 PANTHER CYSTEINE OXYGENASE/2-AMINOETHANETHIOL DIOXYGENASE, RMLC-LIKE JELLY ROLL FOLD PROTEIN-RELATED 40 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1549 Lja-Chr1 16797866 16801000 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1549 K23953 - gmx:100805411 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1549 1 16797866 16801000 Lja1g1549 1 16797866 16801000 ECH