Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1548 ATGAAGGTGGTTGCACTCGTTAGCGGCGGCAAAGACAGTTGCTATGCCATGATGAAAGCTATTCACTATGGCCACCAAATTGTTGCATTGGCCAATTTGCTTCCGCTTGATGATTCTGTGGATGAGCTCGACAGCTACATGTACCAAACTGTTGGGCATCAAATTGTCGTCAGTTATGCTGAATGTATGGGATTGCCATTGTTCAGGAGGCGAATACAAGGATCAACAAGGCATCAGGAGCTTGGTTACAAAACAACTCAAGGTGATGAAGTCGAGGATATGTATATCTTGTTACGGGAAGTGAAAAGGCAGATACCCTCAGTTACCGCAGTATCTTCTGGAGCCATTGCATCTGACTATCAGAGACTGCGGGTGGAAAGTATTTGTTCAAGGTTAGGACTTGTTTCTTTGGCATACTTATGGAAACAAGATCAGTCCTTGCTTCTCCAGGAAATGATTGCAAATGGAATTCTAGCTGTAACTGTGAAGGTAGCTGCCATGGGTTTGGATCCTGCAAAGCACTTGGGTAAAGAATTAGCCTTCTTAAATTCTTATTTGCACAAATTGAAAGAGCTATATGGAATCAATGTCTGTGGTGAAGGAGGGGAGTATGAAACATTAACACTTGATTGCCCACTGTTCACTAATGCTCGCATTGTGCTTGATGACTATCAAGTTGTGATGCACTCTTCAGATTCCATAGCTCCTGTTGGTATCCTTCATCCCTTGGCGTTTCATTTGGAAAGTAAGACAGATGTCCCGTCTTTAAAGTCACAAGACACAATACATGATATTTGTATGCCGAAACTGGGATCTGTGTTTGAAGTGCACAGCAGTCTAGAAATATGTGAAGCTACGTGCAAGCCTGTAGATTATAGTGCTGATCCAATTGATGGTGTAAAACATAAATTTAACATCTCAAAAACGAATAACAAGAGCACATTCTCCATATGTTGCTGGTTGCAAGATTCAGGCAATGGTTTGCAGGAAGATTTGACGATTGTTTTAGGGAAAATTGAATCACAATTAGCTGGCTTTGGTTTTGGTTGGGAGAATGTCCTCTATATTCACCTTTACATTGATGATATGAATAAGTTCTCTGAGGCAAATGAGACATATGTGAAGTTTATAACACAGGAGAAGTGCTCATTTGGTGTCCCATCCCGTAGTACAGTTGAAATGCCTTTAGCAGAAATGGGTTTAAGCAAAGCCTACATTGAAGTTTTGGTAGCAAATAATAAAGATAAAAGAGTTTTGCATGTGCAAAGTATTTCCAGTTGGGCACCTAGTTGCATTGGGCCATACAGCCAGGCTACCTTGCATGACTGTATACTTCACATGGCTGGCCAATTGGGGCTCGACCCTCCTACAATGAATCTTTGCAGTGGAGGCCCTGGTGTTGAACTGGAACAAGCACTCAAAAACAGTGAAGCAGTGGCAAAATGTTTTAATTGTTCAATATCAACATCTGCAATCTCTTTTGTGACATACTGTTCAAAACATGTCTCATCATCAGAGAGACTTGATATACAGACGAAACAAGAAACAAACCTTAGGAAGATGAAGATCTCTGAGTTACAGGAGGGAAAAACACGCAAAACATTAGAACCCATGTTTCTTTATATCCTCGTTCCTGATCTACCTAAAAGAGCTTGTGTAGAAGTGAAGCCTGTTCTTTATGTTGAGGATGGAACAGATGTTAAGATTGAGACCATAACAGAAAAGTCTTGCGCCAAGACATCATCTTGTTGGGGTTTCAAGCAGGAAAGTTGGCATGATTCTTGCATTCAGAAATGTGTGATTTCTGGAAAGATATGTTCTGTTATATTGTCTATTTCAAGTGAGCTGGCTGCAAAGATATGTTCCGATTCTCTTCCTGCTGATTATGTCAATAATGGTCAACATCCTCTACCCAAGGCATCAATGGAGAAGCTATTGAAGTTCTGCGTTTATCTTCTTGACACAGTTATAACAGATAATGACTTTGCCTGGGATGATATAATGTGTTTGAGGTTCTACATCCCAGTGAGTCTTCAAATGTCAGTGGAGCTATTACAACCAATGTTCAACAATGCACTTTCTGAACTTTCTGAGATGAGTCAGAAGAGAGTTAACAATGGCAAGGAGCCAATCTTCAACATAGTTCCTGTCATAGGTGCTGGTAGGTCTGCTTCATCCATGGATGATCTAGTAACCTGTGAATTACTGGCTCGGAAATTGTAA 2223 0.4076 MKVVALVSGGKDSCYAMMKAIHYGHQIVALANLLPLDDSVDELDSYMYQTVGHQIVVSYAECMGLPLFRRRIQGSTRHQELGYKTTQGDEVEDMYILLREVKRQIPSVTAVSSGAIASDYQRLRVESICSRLGLVSLAYLWKQDQSLLLQEMIANGILAVTVKVAAMGLDPAKHLGKELAFLNSYLHKLKELYGINVCGEGGEYETLTLDCPLFTNARIVLDDYQVVMHSSDSIAPVGILHPLAFHLESKTDVPSLKSQDTIHDICMPKLGSVFEVHSSLEICEATCKPVDYSADPIDGVKHKFNISKTNNKSTFSICCWLQDSGNGLQEDLTIVLGKIESQLAGFGFGWENVLYIHLYIDDMNKFSEANETYVKFITQEKCSFGVPSRSTVEMPLAEMGLSKAYIEVLVANNKDKRVLHVQSISSWAPSCIGPYSQATLHDCILHMAGQLGLDPPTMNLCSGGPGVELEQALKNSEAVAKCFNCSISTSAISFVTYCSKHVSSSERLDIQTKQETNLRKMKISELQEGKTRKTLEPMFLYILVPDLPKRACVEVKPVLYVEDGTDVKIETITEKSCAKTSSCWGFKQESWHDSCIQKCVISGKICSVILSISSELAAKICSDSLPADYVNNGQHPLPKASMEKLLKFCVYLLDTVITDNDFAWDDIMCLRFYIPVSLQMSVELLQPMFNNALSELSEMSQKRVNNGKEPIFNIVPVIGAGRSASSMDDLVTCELLARKL* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1548 740 SUPERFAMILY YjgF-like 326 398 IPR035959 -
Lja1g1548 740 Pfam Diphthamide synthase 1 230 IPR002761 -
Lja1g1548 740 PANTHER DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN 1 739 IPR030662 -
Lja1g1548 740 Gene3D - 308 410 IPR035959 -
Lja1g1548 740 Gene3D - 160 255 - -
Lja1g1548 740 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 241 - -
Lja1g1548 740 SUPERFAMILY YjgF-like 417 564 IPR035959 -
Lja1g1548 740 CDD eu_AANH_C_2 435 559 - -
Lja1g1548 740 TIGRFAM MJ0570_dom: MJ0570-related uncharacterized domain 1 231 IPR002761 -
Lja1g1548 740 Gene3D HUPs 1 157 IPR014729 -
Lja1g1548 740 Pfam Endoribonuclease L-PSP 328 398 IPR006175 -
Lja1g1548 740 Pfam Endoribonuclease L-PSP 428 495 IPR006175 -
Lja1g1548 740 Gene3D - 411 561 IPR035959 -
Lja1g1548 740 CDD Alpha_ANH_like_IV 2 214 IPR002761 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1548 K06927 - gmx:100807009 1265.37