Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1542 ATGGAGCGTTTCTCCCCCACCACCACACTGTTCCATTTCTTCCTCTTCTGGTTCTGCTTCTGGTTCTTCTCTTCCACACTCGCCGATCACACTACCACCACGCTCAAAGGTTTTTCTTTTTTCCCCAATTTCAATTGCTACTGCAAATCTTGGAGTCTTGAACGCCGCCGAATGCTGTCTCCACCGCCCATTGTAGTTTATGTTAATATTGAAAGGCCAGTTTTGGATGTATCCCCTTCCCCACTTTCTGGGTATCCAGCTGCTCAAGGGGTCAAAAACATTTTGAAATGTGAACGTGTTCAAGTTTCTGGTATCTCAAGATTGAAACTTGGGAGCTACGCTAATTCATTCCATATTACTCTGGCTCCATCTGTTACAATCCCAGAGAGATTACATAATAAAATTCAGGTTTGTTTCCACAGGAATAATACACTTGGATGGTGTCAGTGTGAAAAGGATGAATGGAAGAGTGTACAGAAGGGGATCTGGGATGTTGTTATGTCACCTTATGAAACTAGATATGTTGATGTGAGGATTGATGGTGACATATCAGGGCCTGTTACAGTTGCGCTTGAAGAAGATTCTCAGCAATGGCGCCTCGTTTGTCTTGCTATCGGGCTGATTCTGCTGTTGTTGGCTCCAATTCTTAGCAATTGGGTTCCATTTTATTATAGCAGTTCGATGGCTATAGGAATTTTTCTTGTCATTATAATCCTTCTTTTTCAGGGCATGAAATTATTGCCAACTGGAAGAAAAAATATCCTTTACTTTACCATATATGGACCAGTGCTTTGGGTTGGGAAATACCTGTTACACCAATTCTCTATGATCGCAAATTCAATACTTCAGAGTTTTGGGATGAATGAAGAGATGCACAACTTAGTTACTTTTATTGTCCTACTGGTTATCGTCTTGGCTGGGGCTGCTTTAGGCTACTGGATTGTTAGGAGATTTGTTATTTCAAAAGAAGATGGTAGTGTGGATGCTGGGGTTGCTGAGTTTGTGAAATGGGCAATGCGCATTTTTGGATACACCTTCATTTGGCAGAGCACTCTAGACCTTACTCTAGCAGTTGGAGCGTTGGTCTCTTCTGTAGCTGTTTGCGAACTTGTTTACTCGATACAATGGCTTCATGAATGGTATGAAACTTCAGGGAATGATGATTATTCACTGGAGTGGATGAAAGGAACACGTGGTCGTGCTGAATTCCTTGGTAAGTCAACCCCTAAAAGAAAGATGTCGAGAAGCCCTCAAGGAAAATTATGGAACAGCCCTAAAAGATCATCATGGTCTGACTCCCCTGTGAGAGGTGTTGTATCTCCATCTTCTGGGATTTCGCCACTATCCTGTGTGGCTCAAGTAGAGCCGGATTATTATTCAACCTTCCACAAGACTCGCAACAGAAAGAAGTTCACAAAGAACGAGTGGGATGAGTTCACTAGAGAATCCACTAAGCAAGCTCTAGCAGAATGGGCAGCATCTCCAGAATTCACTGAGTGGGTCATTGAGCACGCAGACCGGATAAAACTCGTTCCAAGTGAGAATTCAGACGAGGCAATTGGAAGTGAATCAGATTCCACAGAGGTGGGAAGTGGGAATGGATTTCGGCTTTTCAATTGGTGGTGA 1626 0.4305 MERFSPTTTLFHFFLFWFCFWFFSSTLADHTTTTLKGFSFFPNFNCYCKSWSLERRRMLSPPPIVVYVNIERPVLDVSPSPLSGYPAAQGVKNILKCERVQVSGISRLKLGSYANSFHITLAPSVTIPERLHNKIQVCFHRNNTLGWCQCEKDEWKSVQKGIWDVVMSPYETRYVDVRIDGDISGPVTVALEEDSQQWRLVCLAIGLILLLLAPILSNWVPFYYSSSMAIGIFLVIIILLFQGMKLLPTGRKNILYFTIYGPVLWVGKYLLHQFSMIANSILQSFGMNEEMHNLVTFIVLLVIVLAGAALGYWIVRRFVISKEDGSVDAGVAEFVKWAMRIFGYTFIWQSTLDLTLAVGALVSSVAVCELVYSIQWLHEWYETSGNDDYSLEWMKGTRGRAEFLGKSTPKRKMSRSPQGKLWNSPKRSSWSDSPVRGVVSPSSGISPLSCVAQVEPDYYSTFHKTRNRKKFTKNEWDEFTRESTKQALAEWAASPEFTEWVIEHADRIKLVPSENSDEAIGSESDSTEVGSGNGFRLFNWW* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1542 541 PANTHER EXPRESSED PROTEIN 26 529 - -
Lja1g1542 541 PANTHER TRANSMEMBRANE PROTEIN (DUF2215) 26 529 - -
Lja1g1542 541 MobiDBLite consensus disorder prediction 411 434 - -
Lja1g1542 541 Pfam NEMP family 188 465 IPR019358 -
Lja1g1542 541 MobiDBLite consensus disorder prediction 406 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1542 Lja-Chr1 16702070 16708968 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1542 - - gmx:100808605 688.337