Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1535 ATGGGACGAGGACGAGAATGTCACGGGATAAGGGATGCAGTGGATTTGGAACAACATATTCATTGTCTGGAAACTCAGGCTTACAGTTCTATTTTGAAAGCTTTTGTTGCTCAGTCTGATCTTCTTACTTGGGGCAAAGAGGAGCTTATGACTGAGCTACGAAAGGAACTAAATATTACAGATGGTGAACATGCAGAAATCCTGATGAAAACCAACTCAGATGAGTCAATTAAATGGATAAGGGGGCAGAGGAAACTGGGATCTCAGGTTCAGACCTATATCAAAGCTAATACTTCTAGCTGTCCTTCTGCTTCAATGAGAAGTTCAATTATAAGATTGAAAGCTCCGCCCTCTGCTGCATTTTATCCTCAGAAGAAAGTATCACGCAGCAAAGCTTCTCAGATTTCTATTCCTGTTCCTTCTTCGATGCCTGTGAGCAAATTGATCCCATACAACTTTGAAAATAGTTTATCTTGTAGTCTAGCTGCATTTAAAGCCTGTTTACTATAG 510 0.4039 MGRGRECHGIRDAVDLEQHIHCLETQAYSSILKAFVAQSDLLTWGKEELMTELRKELNITDGEHAEILMKTNSDESIKWIRGQRKLGSQVQTYIKANTSSCPSASMRSSIIRLKAPPSAAFYPQKKVSRSKASQISIPVPSSMPVSKLIPYNFENSLSCSLAAFKACLL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1535 169 PANTHER PROTEIN EMSY-LIKE 4 8 148 IPR033485 GO:0050832
Lja1g1535 169 Gene3D ENT domain 11 138 IPR036142 -
Lja1g1535 169 SMART ENT_2 16 89 IPR005491 -
Lja1g1535 169 Pfam ENT domain 18 81 IPR005491 -
Lja1g1535 169 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 16 103 IPR005491 -
Lja1g1535 169 PANTHER OS10G0436850 PROTEIN 8 148 - -
Lja1g1535 169 SUPERFAMILY ENT-like 11 104 IPR036142 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1535 Lja-Chr1 16631353 16633177 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1535 - - lja:Lj1g3v3979360.1 270.011