Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1530 ATGGGTCTCAAAATTTTCATGGTTTTCTTCATGCTAACCTCAGTGTTATTCTTTTTTCTCTTCATCCCCACAAGACTAACCACACAAATCTCCACCTTCAGGAATGTTAACATAGACTCCCTCAGTTTCATCAGAGCCAGCAATTCATCATACCCTGTTACTTTTGCCTACTTGATCTCTGCATCCAAAGGAGATTCTGTGAAACTCAAAAGGCTGCTGAGGGTGCTGTATCATCCAGGGAACTACTATTTGATTCACATGGATTATGGGGCTCCAGAAGCAGAACATAGAGATGTGGCAGAACATGTGGCTAGTGATCCTGTTTATGGTGAAGTTGGGAATGTTTGGATTGTGGGGAAACGCAATTTGGTCACTTACAGAGGACCAACAATGCTTGCAACCACACTCCATGCTATTGCAATACTTCTCAGGACATGTCAATGGGATTGGTTTATTAATCTTAGTGCATCTGATTATCCCTTAGTTACACAAGATGATCTGATCCAGGCTTTTTCTGAGGTTCCAAGGGATATCAATTTCATACAGCATAGCAGTCGCTTGGGTTGGAAATTGAATAAGAGAGGGAAGCCAATAATGATAGACCCTGGGCTTTATAGTCTCAATAAATCAGAGATTTGGTGGGTTATCAAGCAGAGGAGTTTACCAACATCTTTTAAACTCTACACAGGTTCAGCTTGGACAATATTATCAAGATCTTTTGCAGAGTACTGCATTATTGGATGGGAAAATCTTCCAAGGACCCTCCTCCTCTACTACACTAACTTCGTCTCATCCCCAGAAGGCTATTTCCAAACAGTTATATGCAACTCTAAATCCTACAAGAACACCACAGCCAACCATGACCTTCACTACATTACTTGGGACAATCCTCCAAAACAACACCCCAGGTCTCTTGGAATCAAAGATTATCGAAAAATGGTTCTCAGCAACCGTCCTTTCGCGCGAAAATTCAAGCGAAATGATGCCGTTCTTGATAGAATTGATAGGGATCTTCTGAAGCGGTATCGCGGGCATTTTTCTTTTGGTGGGTGGTGCTCTCAGGGTAGTGGTGGAAAGAAGAACAGAGCATGCTCTGGTTTGAGAAGTGAGAATTATGGTCTGCTTAAACCTGGCCCAGCCTCAAGAAGGTTGAAAAATCTGATAACAAAACTTCTATCTGATAGATTCTTTCGCCAACAGCAGTGCAGGTGA 1212 0.4224 MGLKIFMVFFMLTSVLFFFLFIPTRLTTQISTFRNVNIDSLSFIRASNSSYPVTFAYLISASKGDSVKLKRLLRVLYHPGNYYLIHMDYGAPEAEHRDVAEHVASDPVYGEVGNVWIVGKRNLVTYRGPTMLATTLHAIAILLRTCQWDWFINLSASDYPLVTQDDLIQAFSEVPRDINFIQHSSRLGWKLNKRGKPIMIDPGLYSLNKSEIWWVIKQRSLPTSFKLYTGSAWTILSRSFAEYCIIGWENLPRTLLLYYTNFVSSPEGYFQTVICNSKSYKNTTANHDLHYITWDNPPKQHPRSLGIKDYRKMVLSNRPFARKFKRNDAVLDRIDRDLLKRYRGHFSFGGWCSQGSGGKKNRACSGLRSENYGLLKPGPASRRLKNLITKLLSDRFFRQQQCR* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1530 403 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 402 - -
Lja1g1530 403 PANTHER GLYCOSYLTRANSFERASE 1 402 IPR044610 GO:0015020
Lja1g1530 403 Pfam Core-2/I-Branching enzyme 55 313 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1530 Lja-Chr1 16554027 16558741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1530 12 403 Glycosyltransferase AT4G27480 51.691 5.46e-152 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1530 - - gmx:100812712 692.96