Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1512 ATGTCAATTGCAGATCAGAGAAACGTGTCTGCCATCAAAGTTTTCTCTAGAAAGTCCATGTGTTGCTTCTTCACGTTGACAACATTCCTCTTCATCACATCATGTTTATTTGTTCTTCGCTCCACCGGCTCCGACGCCGCACCGGTCTCCATTGATCATGTTTCACAGCTTCTCCCTACCTTGAACAAGACCCAGAATGCAGAATCCTCATTTGGAAACAGAGCAATACTCGTTGACAGTGTGAAAAAAAATGCAGAACCACCAACCATTGAGAAAAACATACAACAATCATCTGGTGTGCCATGTAACAGTGACAAGACTGCAACAATAAGTGACAGCGTTGTTTTGAAAAGTTTGAAAGTTTTCATGTATGATTTGCCTTCTGAGTTCCATTTTGGACTATTGGATTGGAAACCTGAGGGAAACAGTGTTTGGCTTGATATGAGAATCAAGATACCTGGTTACCCTGGGGGTTTGAATTTGCAGCATAGCATAGAGTATTGGCTTACTTTGGATATTCTAGCTTCTGAACTACCTGAATCTTCTTCTTCTAATGCAAGGACTGTGATCAGAGTTAGAAACTCTGCTGAAGCTGATATAGTGTTTGTGCCATTCTTTTCTTCTCTGTGCTATAACAGACACTCCAAAAAGAACAAGGGTTTGCAAGAGAAGTTAGTGAGGTATTTGATGGCTCAAGAGGAATGGAAGAGGACAGGGGGGAGGGACCATTTGATCTTGGCTCACCATCCAAATAGTATGTTGGATGCTAGAATGAAGCTGTGGAATGCAACTTATATACTCTCAGATTTTGGGAGATACCCTCCAAACATAGCTAATGTGGAGAAAGATGTGATTGCCCCTTATAAACATGTTATTCCACTCTATGTTGATGATCACTCCACCTTTGAGAGCCGTCAAACATTGCTTTACTTCCAAGGTGCAATACACAGAAAGGATGGAGGCCATGCTCGGCAAGAACTATTCAATCTTCTGAAAGATGAGAAAGATGTGCATTTTTCATTTGGGAGTGTTCAGAAAGGTGGTATCAAGAAATCCACCGACGGCATGCGTTCATCCAAATTCTGCCTCAACATAGCCGGCGACACCCCCTCATCAAACCGCTTGTTTGACGCCATTGCCAGCCACTGTGTCCCTGTCATCATCAGTGACCAAATTGAGCTTCCATACGAGGATGTCCTTGACTACTCCCAGTTCTGCATATTCATCCGTACAAGGGATGCTCTCAAAAAGAAGTTTTTGATAAACTTTATCAGGAGCATTGGGAAAGATGAGTGGACTAGAATGTGGAACAGGTTGCAAGAGGTTCAGAGTTTCTATGAGTTTCAGTATCCATCTAAGGAGGGTGATGCTGTCCAAATGATTTGGCAGGCTGTCGCGCGTAAGGTCCCTTCCATGAAGTTGAAGATAAACAGGTCTAGGAGGTTCTTCAGGTCTCTTCATGGTAAATAG 1470 0.4286 MSIADQRNVSAIKVFSRKSMCCFFTLTTFLFITSCLFVLRSTGSDAAPVSIDHVSQLLPTLNKTQNAESSFGNRAILVDSVKKNAEPPTIEKNIQQSSGVPCNSDKTATISDSVVLKSLKVFMYDLPSEFHFGLLDWKPEGNSVWLDMRIKIPGYPGGLNLQHSIEYWLTLDILASELPESSSSNARTVIRVRNSAEADIVFVPFFSSLCYNRHSKKNKGLQEKLVRYLMAQEEWKRTGGRDHLILAHHPNSMLDARMKLWNATYILSDFGRYPPNIANVEKDVIAPYKHVIPLYVDDHSTFESRQTLLYFQGAIHRKDGGHARQELFNLLKDEKDVHFSFGSVQKGGIKKSTDGMRSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDQIELPYEDVLDYSQFCIFIRTRDALKKKFLINFIRSIGKDEWTRMWNRLQEVQSFYEFQYPSKEGDAVQMIWQAVARKVPSMKLKINRSRRFFRSLHGK* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1512 489 Pfam Exostosin family 117 422 IPR040911 -
Lja1g1512 489 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Lja1g1512 489 PANTHER EXOSTOSIN FAMILY PROTEIN 9 482 - -
Lja1g1512 489 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 9 482 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1512 Lja-Chr1 16381237 16383772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1512 - K22846 cam:101506167 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1512 1 16381237 16383772 Lja1g1512 1 16381237 16383772 ECH
Lja1g1512 1 16381237 16383772 Lja2g2999 2 59222750 59225887 PCT