Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1508 ATGATTATGAAGCCTTTGAGCAAGATGGTACCAGGAATAACCCTTGTGCTTGTGCTCTGTGTCTGTGTGGGACTTACAAACTCATTAAGGGAGTGCCATTTCCCTGCAATATTCAACTTTGGGGACTCAAATTCTGACACTGGAGGCCTTTCTGCTGCATTTGGACAACCAGGCCCTCCTTTTGGAGAGTCCTTCTTTCATCACCCTGCTAGCCGCTACTGTGATGGACGCCTTGTTGTTGATTTTATTGCAAAGAAGCTAGGACTCCCCTATTTGAATGCATATCTTGATGCTGTTGGGTCAAATTTTAGCCATGGAGCCAACTTTGCAACTGCTGGATCCACAATTAGACCCCAGAATACAACCCTTCATCAATTTGGTGGCTTCAGTCCTTTCTCTTTGGATGTTCAATTCAATCAGTTCAATGATTTTCAACGCAGGACTCAAATTTTTCGCAACAAAGGTGGGGTATTTGAAAAGTTGTTACCAAAAGCACAAGATTTTTCCCGTGCATTGTACACATTTGATATTGGTCAGAATGACTTAACCGCTGGTTACTTCCACAACATGTCCACTGATCAAGTTAGAGCATGTGTTCCTGATGTTTTGGCTCAATTCAAGAACACAATCAAGTATGTATATAGTCATGGAGGAAGGTCATTCTGGATTCATAATACTGGTCCTGTTGGTTGTTTGCCATACATCATGGATCTTCACCCTGTAAAGGCACATGAAGTGGACAAAGCAGGATGTGCAAAACCTTATAATGAAGTGGCTCAGTTCTTCAACCGTGAATTAAAAGAAGCTGTTGTTCAACTAAGGAAAAAGCTTCACTCTGCTTCTATTACATATGTTGATGTTTACTCAGTGAAGTACTCTCTCATTAGTCAAGCAAAGAAACATGGTTTTGGGGAACCATTGAGAGCTTGTTGTGGGCACGGTGGGAAGTACAACTACAACATACACATTGGATGTGGAGCAAAGGTGAAGGTTCATGGCAAAGAGATCCTGTTGGGAAAACCATGTGAGGATCCATCGGTTTCGGTTAATTGGGATGGTGTTCATTTTACTGAGGCTGCTAACAAGTGGGTGTTTGATCAAATTGTAGATGGTTCATTTTCTGATCCACCAATTCCTTTGAATATGGCTTGTCATAAGCACCCTTAG 1167 0.419 MIMKPLSKMVPGITLVLVLCVCVGLTNSLRECHFPAIFNFGDSNSDTGGLSAAFGQPGPPFGESFFHHPASRYCDGRLVVDFIAKKLGLPYLNAYLDAVGSNFSHGANFATAGSTIRPQNTTLHQFGGFSPFSLDVQFNQFNDFQRRTQIFRNKGGVFEKLLPKAQDFSRALYTFDIGQNDLTAGYFHNMSTDQVRACVPDVLAQFKNTIKYVYSHGGRSFWIHNTGPVGCLPYIMDLHPVKAHEVDKAGCAKPYNEVAQFFNRELKEAVVQLRKKLHSASITYVDVYSVKYSLISQAKKHGFGEPLRACCGHGGKYNYNIHIGCGAKVKVHGKEILLGKPCEDPSVSVNWDGVHFTEAANKWVFDQIVDGSFSDPPIPLNMACHKHP* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1508 388 Gene3D SGNH hydrolase 26 372 IPR036514 -
Lja1g1508 388 Pfam GDSL-like Lipase/Acylhydrolase 37 368 IPR001087 GO:0016788
Lja1g1508 388 Coils Coil 263 283 - -
Lja1g1508 388 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 28 386 - -
Lja1g1508 388 SUPERFAMILY SGNH hydrolase 37 369 - -
Lja1g1508 388 CDD SGNH_plant_lipase_like 35 372 IPR035669 -
Lja1g1508 388 PANTHER BNAA06G32900D PROTEIN 28 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1508 Lja-Chr1 16288439 16293283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1508 35 387 Acyl Lipid Metabolism Gene Families AT4G10950 29.235 4.24e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1508 - - gmx:100819985 673.315