Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1502 ATGGGAAAGGAACAAGAGGAGAACATTTTGCAGGACCAAAACTATACAGAGGAGAGTGTTGATCAAGAGGAAGAGTCACTAAGGAAAAGGGCATGGAAAGAAAGCAAGAAGATGTGGATGGTAGCAGGCCCTGCCATATTTACAAGGTTTTCATACTTTGGAATAATAGTAGTTTGTCAATTCTTCATTGGACATATTGGTTCCACAGAACTAGCTGCCTATGCTGTTGTCCAAACAGTGCTTGTCAGGTTTGCAAATGGTGTACTGCTGGGGATGGCAAGTGCACTGGAAACTCTATGTGGGCAAGCATATGGTGCCAAAAGATATGAAATGCTTGGAGTGTATCTTCAAAGATCATGGATAATCTTGTTCTTAACCTCAATCTTGCTTCTTCCTATTTACATCTTCACAACCCCAATTTTAGAGGCTTTAGGCCAAGACAAAAAAATTGCTCAAGTTGCAAGAAGCATTTCTCTATGGGCAATAGGTATCATCTTTGCTTTCTCTGTGTCATTCACTTGCCAAACGTTCCTTCAAGCACAGAGCAAGAACAAGATTATTGCATATTTAGGAGCAGTTTCTATTTCAATTCATGTGTTTCTGTCATGGCTTCTAACTGTTAAGTTCAAGTTTGGGCTCAATGGGGCAATGACATCAACAATTTTAGCATATTGGATACCAAATTTTGGGCAGCTTGTGTTTATCATGACTCAGTGCCCTGACACATGGATGGGTTTCTCATTTTTGGCCTTCAAAGATCTCTGGCCTGTTATCAAGCTTTCCTTGTACTCTGGAGCTATGACATGTGTTGAGATCTGGTACAACTCAATTTTAATTATTATAACAGGGAACATGAAAAATGCAGAGGTTTCCATTGATGCTCTGGCCATATGCCTCAGTATCCATGGGTGGGAGATGATGATAGCCCTGGGTTTCTTTGTTGCTGCTAGTGCCCGAGTTTCAAATGAGCTTGGAAGAGGCGATTCAAAAGCTGCAAAATTTTCCATTCTAATAACAGTTCTCACATCATTTTCCATTGGTTTGGTGTTATTCTTTGTGTTTCTATTTTTGAGGGAAAGACTTTCTTATATTTTCACTTCAGACCCAAAGGTAGCTGAAGCAGTTGGGGACTTATCTCCTTTATTGTCAATATCCATGTTGTTGAACAGTGTTCAACCTGTTCTCTCTGGAGTTTCTGTTGGAGCTGGCTGGCAAAGTGTTGTAGCATGTGTAAACATAGGCTGTTATTACTTCATCGGTATTCCTGTTGGACTGGTTCTTGGCAACCTTATACATTTGCAAGTAAAGGGTGTTTGGATTGGAATGTTGTTTGGAACATTTGTTCAAACCGTAATAGTAACTACAATCACACTGAAAACTGATTGGGAAAATCAGGTAGTGATAACTCGAAATCGTGTTAACAAATGGGCTGTCATGGAGAATATAGAGCCAAATAGCAGATCAGACATTTCAAGCTAA 1479 0.3989 MGKEQEENILQDQNYTEESVDQEEESLRKRAWKESKKMWMVAGPAIFTRFSYFGIIVVCQFFIGHIGSTELAAYAVVQTVLVRFANGVLLGMASALETLCGQAYGAKRYEMLGVYLQRSWIILFLTSILLLPIYIFTTPILEALGQDKKIAQVARSISLWAIGIIFAFSVSFTCQTFLQAQSKNKIIAYLGAVSISIHVFLSWLLTVKFKFGLNGAMTSTILAYWIPNFGQLVFIMTQCPDTWMGFSFLAFKDLWPVIKLSLYSGAMTCVEIWYNSILIIITGNMKNAEVSIDALAICLSIHGWEMMIALGFFVAASARVSNELGRGDSKAAKFSILITVLTSFSIGLVLFFVFLFLRERLSYIFTSDPKVAEAVGDLSPLLSISMLLNSVQPVLSGVSVGAGWQSVVACVNIGCYYFIGIPVGLVLGNLIHLQVKGVWIGMLFGTFVQTVIVTTITLKTDWENQVVITRNRVNKWAVMENIEPNSRSDISS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1502 492 Pfam MatE 44 204 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja1g1502 492 Pfam MatE 266 425 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja1g1502 492 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 478 - -
Lja1g1502 492 MobiDBLite consensus disorder prediction 1 22 - -
Lja1g1502 492 TIGRFAM matE: MATE efflux family protein 44 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja1g1502 492 PANTHER PROTEIN DETOXIFICATION 19 478 - -
Lja1g1502 492 CDD MATE_eukaryotic 34 466 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1502 Lja-Chr1 16222152 16227522 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1502 K03327 - gmx:100775619 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1502 1 16222152 16227522 Lja1g1502 1 16222152 16227522 ECH