Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1499 ATGGAGGGGGATCGAAAGGAGAAGCTGCTGAAAACAGTAGAGGAAGAAGAAGGAGAAGAAGAAAAGTTGTCACTATGGAAGAGGGTGTGGAAAGAGAGCAAGAAGATGTGGATTGTGGCAGGTCCAGCCATCTTCAATAGAATCTCCACTTTTGGGATCTATATTATCAGTCAGGCATTTGTAGGTCATATTGGATCAAAGGAATTGGCTGGTTTTGCTATTGTTTACACTGTTTTCATAAGGTTTGCTAATGGTATTCTGTTAGGAATGGCCAGTGCATTGGCAACACTTTGTGGACAAGCATATGGTGCCAAAGAACTCAGCATGATGGGGGTGTATCTTCAAAGATCATGGATAGTTTCATTCTTAACTGCACTCTTTATTCTTCCACTGTTCATCTTCACAACCCCAATTCTGAGGATCTTAGGCCAAGACGAAAGCATAGCCCAAGAGGCAGGAATCATTTCTCTTTGGTCAATTCCTGTCATGTTTTCTTTATTTGTCTCATTCACTTGCCAGCAATTCCTGCAATCTCAAAGCAAGAACATCATCATTGCATTCCTTGCAGCTTTCTCATTAACTATTCATGTGATCCTCTCTTGGCTTTTGACAATTCAATACAAGTTTGGGATTGTTGGTGCTTTGACCTCAACAAGTTTGGCATTCTGGATTCCCAACATTGGTAACCTTATTTTTATCACTTGTGGTTGGTGTCCTGATACATGGAAAGGTTTCTCATGTTTAGCATTCAAAGATCTTTGGCCTGTCTTCAAGCTCTCTATTTCAGCCGGCGCTATGTTAGCTCTTGAGCTTTGGTACAACACAATATTGGTTCTATTAACAGGCAACATGGAAAATGCAGAAGTTCAAATTGATGCTCTTTCCATATGCTTGAACATCAATGGATGGGAACTGATGATATCATTTGGTTTCCTGGCTGCAGCAAGTGTTAGAGTGGCAAATGAGCTTGGAAAAGGAAGCTCCAAATCTGCAAAGTTCTCTGTGGCTGTATCAGTGCTAACATCCTTAACCATTGGCTTCATTCTCTTCTTATTCTTCTTGTTCTTTAGAGAAAGACTTGCTTATATATTCACCAAAAATAAAGATGTGGTCAATGCTGTTGGGGATTTGTCACCTTTGTTGGCAGTCTCTATACTTCTTAACAGTGTCCAACCAGTGCTCTCAGGAGTTGCTGTGGGAGCAGGGTGGCAAAGCACTGTAGCACTTGTGAATTTAGGGTGTTATTACATCATAGGTCTTCCTGTAGGAATTGTACTTGGTAATGTTTTCCATTGGCAAGTCAAGGGTATCTGGGTTGGAATGTTGTTTGGAGTAGCTATTCAAACTATAGTGCTGCTTATAATCTGCTACAAAACTGATTGGGATGAGCAGGTACTTAAAGCTCGTAATCGTGTTAACAGGTGGTCTAAGGTGGAACCTGATCATAATAAATCAGATAACTAG 1464 0.4071 MEGDRKEKLLKTVEEEEGEEEKLSLWKRVWKESKKMWIVAGPAIFNRISTFGIYIISQAFVGHIGSKELAGFAIVYTVFIRFANGILLGMASALATLCGQAYGAKELSMMGVYLQRSWIVSFLTALFILPLFIFTTPILRILGQDESIAQEAGIISLWSIPVMFSLFVSFTCQQFLQSQSKNIIIAFLAAFSLTIHVILSWLLTIQYKFGIVGALTSTSLAFWIPNIGNLIFITCGWCPDTWKGFSCLAFKDLWPVFKLSISAGAMLALELWYNTILVLLTGNMENAEVQIDALSICLNINGWELMISFGFLAAASVRVANELGKGSSKSAKFSVAVSVLTSLTIGFILFLFFLFFRERLAYIFTKNKDVVNAVGDLSPLLAVSILLNSVQPVLSGVAVGAGWQSTVALVNLGCYYIIGLPVGIVLGNVFHWQVKGIWVGMLFGVAIQTIVLLIICYKTDWDEQVLKARNRVNRWSKVEPDHNKSDN* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1499 487 Pfam MatE 266 424 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja1g1499 487 Pfam MatE 42 202 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja1g1499 487 PANTHER PROTEIN DETOXIFICATION 15 476 - -
Lja1g1499 487 TIGRFAM matE: MATE efflux family protein 42 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja1g1499 487 CDD MATE_eukaryotic 32 467 IPR045069 GO:0042910|GO:1990961
Lja1g1499 487 PANTHER MULTIDRUG RESISTANCE PROTEIN 15 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1499 Lja-Chr1 16173608 16177664 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1499 K03327 - gmx:100792122 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1499 1 16173608 16177664 Lja1g1499 1 16173608 16177664 ECH