Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1498 ATGTCTTCAAGAACATTGAGGAGAAGGCTCCATCATGGAGATGTTGATGGCAAAAGGCAGGAGCATTTGGAGGCTTCGGGGTTAGATGCTTTGAGTGAGCCCTTGCTGGGGGGTGATGATTATATCGAGAATAAGAAGATATGTACACTTGAAGATATTTGGGATGACGAGAGGAAGAAGGCGCAGTTTCACTGGACATTTTTATTTTCAAACCTCATAGCGCAATGGGCACAGTGGTTAGCAAACATTGTACTAGGGTCTGGATCTCTTATTGGGCGTCTTTTATCTGTTTCTTCTACTGCTCTATATTTGCAAAATAATAGGATGCTTCCCCAACCTCTTACCCCTCTGCAGGAAGAAAGACTAAGAAACTTACGGCAGCGGCTTGAAGTCCCCTTTGATGGTTCTAAAACAGAGCACCAAGATGCACTCAAACAATTGTGGAAATTAGCTTTTCCTGACAGGGAGATTCCCCCACTTAAATCAGACCTTTGGAAGGAAATGGGATGGCAAGGTTCAGACCCATCAACAGATTTTAGGGGTGGAGGATATATATCATTAGAGAACCTCATTTTTTTTGCACAGAAGTATCCGGGTTCATTCCAGCGGTTATTGCATAAACAAGATGGAGCCAGAGCAGAGTGGGAATATCCATTTGCAGTAGCTGGAATCAATATTTCTTTTATGTTGGCGCAGATGCTGGATCTTCAAGCAGGGTATCCATCTTCTTTGTCAGGATTCCGTTTCCTGCAGCTGCTTGAGGAGGATGAAATGGCATTCGACATCCTTTATTGTGTTGCCTATCAAATGATGGATGCTCAGTGGCTAGCAAAGCGTGCTACATATATGGAATTTAACGATGTTTTGAAGTCCACAAGAACGCAGTTAGAGCGTGAGCTTGCTCTTGAAGACATCTCCAGGGTGAAAGATTTACCTTCTTACAACATGTTGAGAGATGATTAG 963 0.432 MSSRTLRRRLHHGDVDGKRQEHLEASGLDALSEPLLGGDDYIENKKICTLEDIWDDERKKAQFHWTFLFSNLIAQWAQWLANIVLGSGSLIGRLLSVSSTALYLQNNRMLPQPLTPLQEERLRNLRQRLEVPFDGSKTEHQDALKQLWKLAFPDREIPPLKSDLWKEMGWQGSDPSTDFRGGGYISLENLIFFAQKYPGSFQRLLHKQDGARAEWEYPFAVAGINISFMLAQMLDLQAGYPSSLSGFRFLQLLEEDEMAFDILYCVAYQMMDAQWLAKRATYMEFNDVLKSTRTQLERELALEDISRVKDLPSYNMLRDD* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1498 320 ProSiteProfiles ELMO domain profile. 139 300 IPR006816 -
Lja1g1498 320 PANTHER ENGULFMENT AND CELL MOTILITY 8 318 - -
Lja1g1498 320 PANTHER ELMO/CED-12 FAMILY PROTEIN 8 318 - -
Lja1g1498 320 Pfam ELMO/CED-12 family 124 289 IPR006816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1498 Lja-Chr1 16157471 16163871 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1498 K23538 - gmx:100799350 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1498 1 16157471 16163871 Lja1g1498 1 16157471 16163871 ECH