Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1483 ATGAGGGACATGCTTGTGAAGCGTTTTGGGTTCAATCCGAAAAACATTGAGCTCCTCACAGATGAGCCTGGCTCTTCATCACCTATGCCTACTGGTTCCAACATTAAGCAGGCATTAGCTAGCATGATTGATCAAGCTGAAACAGGGGATGTGCTCTATTTTCATTATAGTGGACATGGAACAAGGTTCCCTTCCAAGAAACATGGCCACCCCTACCGCTATGAGGAAGCAATTGTGCCTTGCGACTTCAATCTCATCACTGATTTGGACTTCAGGCAACTGGTGAACAAGCTGCCAAAGGGAACAAGCCTCACATTTCTCTCAGACTCATGCTATAGTGGTGGCCTCATTGACAAAGAGAAGGAACAAATTGGACCATCTTCACTGGTTCATGAAAATGACTCATCATTGAAACTCACTAGCACCCCCAAGACAATCCCTATTAAGTCCATACTTCAACACCTCTCATCACTAACAAACATAAGCACCACAGACATTGGAACCCACCTGCTAGAATTCTTCGGCTCCGAAGCCAGTTCGAGATTTCAGCTCCCTTCACATCATCTTGATTTGTTGAACTTGAACCAATCACTGAGGCCTGATGAGGGGATTCTGTTGAGTGGTTGCCAATCTGATGAGACCTCTGCAGACATTAACCCGAACGTGAGTGGTGGAAAGGCGTATGGAGCATTTAGCAATGCGGTTCAGATGGTGTTGAAGGAGAACCCGGGTCAGCTGAGCAATAGAGAGGTTGTGATGAAGGCCAGGAATGTGCTGCAAACGCAGGGAATTGTGCAGCATCCTTGCCTCTATTGCAGTGATGAGAATGCTAATGCTGCCTTCTTGCGACAACATCAGAACTCAGATTTATGA 873 0.4628 MRDMLVKRFGFNPKNIELLTDEPGSSSPMPTGSNIKQALASMIDQAETGDVLYFHYSGHGTRFPSKKHGHPYRYEEAIVPCDFNLITDLDFRQLVNKLPKGTSLTFLSDSCYSGGLIDKEKEQIGPSSLVHENDSSLKLTSTPKTIPIKSILQHLSSLTNISTTDIGTHLLEFFGSEASSRFQLPSHHLDLLNLNQSLRPDEGILLSGCQSDETSADINPNVSGGKAYGAFSNAVQMVLKENPGQLSNREVVMKARNVLQTQGIVQHPCLYCSDENANAAFLRQHQNSDL* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1483 290 Pfam Caspase domain 1 277 - -
Lja1g1483 290 Gene3D - 1 164 - -
Lja1g1483 290 Gene3D - 175 285 - -
Lja1g1483 290 PANTHER METACASPASE-4 1 286 - -
Lja1g1483 290 PANTHER METACASPASE-9 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1483 Lja-Chr1 15983314 15985052 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1483 - - gmx:100781510 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1483 1 15983314 15985052 Lja1g1483 1 15983314 15985052 ECH