Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1480 ATGGCGTCCCAAGTTGTCCGTGAGTGGTCAGGAATCAACACATTTGCACCTGCTACCCAGAACAAGTTGTTTGAGCTTTTGGGGCAACTTAAACAAGAGAATGTGAACTCCTTGACTATACTTGTTATGGGGAAAGGTGGTGTTGGCAAGTCTTCAACTGTCAACTCTATCATTGGGGAAAGAGTTGTTTCAATCAGTCCTTTTCAGTCGGAAGGGCCTAGGCCTGTGATGGTATCGCGATCAAGGGCAGGTTTTACATTGAACATCATTGACACTCCTGGTCTCATTGAAGGGGGATATATCAATGATATGGCACTTAATTTGATAAAATGTTTCCTTCTGAACAAGACCATAGATGTTTTGCTTTATGTGGACCGCTTGGATGCATATAGAGTGGACAACTTGGACAAGTTAGTTGCTAAGGCTATAACTGATAGTTTTGGGAAAGCAATATGGAACAGGGCTATAGTTGCACTCACACATGCCCAGTTCTCTCCACCTGATGGATTGCCTTATGAGGAATTCTTCTCAAAAAGATCTGAGGCTCTCTTGAAAGTTGTTAGATCAGGTGCCCGGATTAAGAAAGATGCCTCCCAGGCTTCTGCGATTCCCGTTGTTTTGATCGAGAACAGTGGGAGATGCAACAAAAATGATAGTGATGAAAAGGTTCTTCCAAATGGGATTGCATGGATTTCTAATCTAGTCCAAAAAATCACAGAAGTTGCATTGAACAAAAGTGAGTCTATTCATGTTGATAAGAATTTGATTGAAGGGCCAAATCCAAATCAGACTGGAAAATTATGGATTCCTCTCCTGTATGCATTACAATATTTCTTTGTGATAAAGCCGATAGAAGGACTGATCCAGCAGGACATTTCAAGTGAGAGTAGGCCTTCATGGGAGATGCGAGATGCAGGTTTACGCAAAAGAGATCAAAGGGATCTCTATTAG 951 0.4185 MASQVVREWSGINTFAPATQNKLFELLGQLKQENVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNLIKCFLLNKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKAIWNRAIVALTHAQFSPPDGLPYEEFFSKRSEALLKVVRSGARIKKDASQASAIPVVLIENSGRCNKNDSDEKVLPNGIAWISNLVQKITEVALNKSESIHVDKNLIEGPNPNQTGKLWIPLLYALQYFFVIKPIEGLIQQDISSESRPSWEMRDAGLRKRDQRDLY* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1480 316 ProSiteProfiles AIG1-type G domain profile. 35 259 IPR006703 GO:0005525
Lja1g1480 316 CDD Toc34_like 7 252 - -
Lja1g1480 316 PIRSF Toc33/toc34 1 309 IPR005688 GO:0006886|GO:0009707|GO:0015450
Lja1g1480 316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 257 IPR027417 -
Lja1g1480 316 Gene3D - 1 267 IPR027417 -
Lja1g1480 316 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 1 300 IPR045058 -
Lja1g1480 316 PANTHER TRANSLOCASE OF CHLOROPLAST 1 300 - -
Lja1g1480 316 Pfam AIG1 family 38 228 IPR006703 GO:0005525
Lja1g1480 316 TIGRFAM 3a0901s02IAP34: GTP-binding protein 1 310 IPR005688 GO:0006886|GO:0009707|GO:0015450
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1480 Lja-Chr1 15948852 15952702 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1480 - - gmx:100782594 542.347