Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1465 ATGGGTTTATACAAGGCCTCGTTCATTGTTGCTGCGCTCCAATTGTGCATAGCGGTTAGCCTTTGCGCTATCAAAGTAAATGCTGACCTGAACGCAACTCTAACTGTAGATGCTCACGAGACATCTGGAAAGCCTATATCTGAGACTCTTTTTGGATTATTCTTTGAGGAGATCAATCATGCTGGTGCTGGGGGATTGTGGGCTGAGCTTGTGAGCAACCGAGGGTTTGAAGCTGGAGGCCCTAACATTCCTTCGAATATTGATCCATGGTCAATTATTGGAAATGAATCATTTATTAATGTTGAAACGGATCGTACCTCCTGCTTTGATCGTAACAAGATTGCACTTAGATTGGAGGTGTTATGTGACAGTAAGGGTGACAACATTTGCCCAGCTGATGGTGTTGGTGTCTTTAACCCTGGTTTCTGGGGCATGAATATAGAGCAAGGGAAGAAATACAAAGTGGTCTTCTACGTTCGTTCAACAGGATCACTTGATCTAACAGTTTCATTGACTGGATCAAATGGTGTCCTGGCTTCAAATGTGATAACGGGTTCTGCGTCTGATTTTTCGAACTGGAAGAAGGTGGAGACTTTATTGGAGGCTAAGGCAACAAATCATAACTCAAGACTTCAATTAACAACTACTGCAAAGGGTGTGATATGGCTGGACCAAGTGTCTGCCATGCCACTAGACACATATAAGGGACGTGGTTTCCGAAGTGAACTCGTCGGAATGCTGGCAGATCTGAAACCAAGATTCATCAGATTTCCGGGTGGTTGTTTTGTTGAAGGAGAATGGTTAAGAAATGCTTTTCGATGGAAAGAAAGCATTGGACCTTGGGAAGAGAGACCGGGGCACTTTGGTGATGTTTGGAAGTACTGGACTGATGATGGCCTTGGCTATTTTGAGTTTCTCCAACTAGCAGAGGACTTGGGTGCTTTACCAATTTGGGTATTTAATAATGGTGTCAGCCATAATGACGAAGTTGATACTTCCGCTGTCTTACCTTTTGTCCAAGAAGCCCTCGACGGAATTGAGTTTGCGAGAGGTGATCCCACTTCAAAGTGGGGTTCCATTAGAGCTTCTATGGGACACCCGGAGCCATTTAACCTCAAATATGTTGCTGTCGGAAATGAGGATTGTGGGAAAAAGAACTATCGAGGAAACTACCTGAAATTCTATAGTGCAATAAGAAGTGCTTATCCGGATATCCAAATCATCTCAAATTGTGATGGTTCTTCTCGACCTTTAGATCACCCAGCTGACATTTATGATTATCATATTTATACCAACGCGAACGACATGTTTTCAAGGTCTAGCACATTTAACACCGCATTGAGAAGTGGTCCAAAGGCTTTTGTAAGTGAGTACGCTGTGACCGGAAACGATGCTGGGACAGGAAGCCTTTTGGCAGCCATAGCTGAGGCCGGTTTCCTTCTTGGACTGGAAAAGAACAGCGATATCGTCAAAATGGTTAGCTATGCTCCACTTTTTGTAAATGCCAATGATAGGAGGTGGAACCCAGATGCAATTGTGTTCAACTCCTTTCAGTCCTACGGAACTCCTAGCTACTGGGTGCAGCTTTTTTTCTCGGAGTCAAGTGGAGCAACACTTCTGAACTCGTCACTTCAAACATCTTCCTCAAGCTCACTTATTGCATCAGCAATTAATTGGCAAAGTTCTGCAGATAAGAAAAATTACATTAGAATAAAGGTTGTGAACTTTGGGGCCAACACTGTGAACCTCAAGATTTCTTTAAATGGGTTGGACCCTAATTCATTGCAGCCATCAGGATCAACAAGGACTGTGCTTACATCTGCGAATGTAATGGATGAGAATTCCTTCTCACAGCCAAAAAAGGTGGTGCCAATTCAGAGTCTACTTCAAAATGTTGGGAAGGAGATGAATGTTGTAGTGCCACCACATTCATTCTCATCGTTTGATTTGTTGAAAGAATCCAGTAATCTGAAGATGGTAGGAGGCGGTTCTTCCACAAGATCTTCTATTTAA 2013 0.4317 MGLYKASFIVAALQLCIAVSLCAIKVNADLNATLTVDAHETSGKPISETLFGLFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSIIGNESFINVETDRTSCFDRNKIALRLEVLCDSKGDNICPADGVGVFNPGFWGMNIEQGKKYKVVFYVRSTGSLDLTVSLTGSNGVLASNVITGSASDFSNWKKVETLLEAKATNHNSRLQLTTTAKGVIWLDQVSAMPLDTYKGRGFRSELVGMLADLKPRFIRFPGGCFVEGEWLRNAFRWKESIGPWEERPGHFGDVWKYWTDDGLGYFEFLQLAEDLGALPIWVFNNGVSHNDEVDTSAVLPFVQEALDGIEFARGDPTSKWGSIRASMGHPEPFNLKYVAVGNEDCGKKNYRGNYLKFYSAIRSAYPDIQIISNCDGSSRPLDHPADIYDYHIYTNANDMFSRSSTFNTALRSGPKAFVSEYAVTGNDAGTGSLLAAIAEAGFLLGLEKNSDIVKMVSYAPLFVNANDRRWNPDAIVFNSFQSYGTPSYWVQLFFSESSGATLLNSSLQTSSSSSLIASAINWQSSADKKNYIRIKVVNFGANTVNLKISLNGLDPNSLQPSGSTRTVLTSANVMDENSFSQPKKVVPIQSLLQNVGKEMNVVVPPHSFSSFDLLKESSNLKMVGGGSSTRSSI* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1465 670 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1-LIKE 13 669 - -
Lja1g1465 670 SUPERFAMILY (Trans)glycosidases 208 539 IPR017853 -
Lja1g1465 670 Gene3D - 533 650 IPR013780 -
Lja1g1465 670 Pfam Alpha-L-arabinofuranosidase C-terminal domain 457 644 IPR010720 GO:0046373|GO:0046556
Lja1g1465 670 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 13 669 - -
Lja1g1465 670 Gene3D Glycosidases 213 532 - -
Lja1g1465 670 SUPERFAMILY Glycosyl hydrolase domain 522 647 - -
Lja1g1465 670 SUPERFAMILY Galactose-binding domain-like 69 227 IPR008979 -
Lja1g1465 670 SMART alpha_l_af_c 456 644 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1465 Lja-Chr1 15785102 15794161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1465 7 667 Glycoside Hydrolase AT3G10740 69.985 0.0 975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1465 K01209 - gmx:100787207 1140.56