Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1464 ATGTCTTTCTTTACTAGTTCCTACAAAGCTTTTCTTTACTCTTGGTCTTTGCTAGCAATTTTGGTCATTCTTCAATGCAGTGCTGATGGAAATTACACATCAACACTTGTGATTGATGGTTCGCAAGGATCTGGAATGAAAATTCCAGACACATTTTTTGGAGCATTCTTTGAAGAGATTAACCATGCTGGAGCTGGAGGATTGTGGGCAGAACTTGTGAGGAACAGAGGTTTTGAAGAGGGAGGCCCCACAATTCCCTCAAATATTTATCCTTGGACAACAATTGGAGATGAATCATTAGTATATGTATCAACTGATCGAACCTCTTGTTTTGAGCGTAATAAGAATGCCCTGTATATAAAGGTTCTTTGTGATGGAGCCAAAACTTGTCTACATGGTGGTGTTGGTATCTCCAACCCTGGTTTTTGGGGCATGAACATTGAGAAAGGGAAGAAATATAGAGTGGTCTTCTATGTTAGATCATTACTTGGTGAAATTGATCTAGAAGTTTCATTTGTCGGCTCTGACAATGGTACAAAACTGGCTTCAACTCGCATAAGGGATTCTGGGCATCAAGTCGAAAGGTGGAGAAAGATTGAGACCATACTTGAAGCCAAGGATACAAATCATTATTCAAGTCTTCAAATAACAACAAGCCTTTCGGGAGTTGTATGGTTAGATCAAGTTTCAGCTATGCCTTTGGACACATATAAGGGTCATGGTTTCCGAAAGGATCTTTTTCAAATGGTGGCAGATCTCAATCCAAGATTTTTCAGATTCCCGGGTGGTTGTTTTGTTGAAGGAGATTATCTAAGAAATGCATTTAGGTGGAAAGACACAGTTGGATCCTGGGAGGAAAGACCAGGACACTTTGGTGATAAATGGCATTACTGGACTGATGATGGACTAGGCTATTTTGAGGGCCTCCAGCTAGCAGAGGATCTTGGTGCGTTGCCAGTGTGGGTGTTTAACAATGGTATCAGCCATAATGAAGAAGTCAATACTACAGAAATTTTACCGTTTGTGCTAGAAGCCTTAGAGGGCATTGAGTTTGCCAGAGGTTCTCCAACATCATACTGGGGCTCTCGTAGAGCTGCCATGGGACATCCTAAGCCATTTGACTTGAGAATTGTTGCAGTTGGAAATGAAGATTGCAGTCATTATAACTACCAAGGAAACTACATGAAGTTCTATAATGCTATAAAACGTGCTTATCCAGATATTCAGATTATCTCAAACTGCGATGGCTCCAAAAGCCCGTTAAAACACCCCGCTGATTTTTATGATTTCCATCTTTATGGACCTTCGATGGAGATGTTCTCGAGTCATACCAAGTTTGATCATGCACCAAGATCCGGCCCAAAGGCGTTTGTTAGTGAATATGCTGTAAATGTGAAGGAAGATGCTGGAACAGGAAGCTTATTATCAGCTTTGGCTGAAGCTGCATTCCTTATTGGACTTGAAAAAAATAGTGATGTTGTCCACATGGTCAGCTATGCACCTCTCTTTGTAAACTCAAATGACCGGACGTGGTCACCGGATGCAATTGTATTTAACTCTCACCAGCATTATGGAACTCCTAGTTATTGGCTCCAACGTATGTTCACAGAGTCAAGTGGAGCAACCTTGCTTAAATCAACACTTCAAACTTCTTCCCAGTCACTTGTTGCATCTGCAATTGAGTATGCAAATTCTGAAGATAAGAAGAATTACATAAGAGTGAAGGTAGTTAACTTTGGAAGTGGTTCTGAGAGCTTTAGGATTTCCATAAATGGATTGAAGTCAAAAGTGAAACAGAGTGGCTCAAGAAAAACAGTCCTCACAGCAGCCAATGTAATGGATGAGAATTCCTTCTCAGAGCCAAACAAGATTGTGCCACAACAAACTCCAATTGAGGGAGCAAGCACAGACATGAAAGTTGAACTTCCTCCTCATTCAGTTACATCATTTGATCTATTAAAGTAG 1965 0.4076 MSFFTSSYKAFLYSWSLLAILVILQCSADGNYTSTLVIDGSQGSGMKIPDTFFGAFFEEINHAGAGGLWAELVRNRGFEEGGPTIPSNIYPWTTIGDESLVYVSTDRTSCFERNKNALYIKVLCDGAKTCLHGGVGISNPGFWGMNIEKGKKYRVVFYVRSLLGEIDLEVSFVGSDNGTKLASTRIRDSGHQVERWRKIETILEAKDTNHYSSLQITTSLSGVVWLDQVSAMPLDTYKGHGFRKDLFQMVADLNPRFFRFPGGCFVEGDYLRNAFRWKDTVGSWEERPGHFGDKWHYWTDDGLGYFEGLQLAEDLGALPVWVFNNGISHNEEVNTTEILPFVLEALEGIEFARGSPTSYWGSRRAAMGHPKPFDLRIVAVGNEDCSHYNYQGNYMKFYNAIKRAYPDIQIISNCDGSKSPLKHPADFYDFHLYGPSMEMFSSHTKFDHAPRSGPKAFVSEYAVNVKEDAGTGSLLSALAEAAFLIGLEKNSDVVHMVSYAPLFVNSNDRTWSPDAIVFNSHQHYGTPSYWLQRMFTESSGATLLKSTLQTSSQSLVASAIEYANSEDKKNYIRVKVVNFGSGSESFRISINGLKSKVKQSGSRKTVLTAANVMDENSFSEPNKIVPQQTPIEGASTDMKVELPPHSVTSFDLLK* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1464 654 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 8 653 - -
Lja1g1464 654 Gene3D - 535 652 IPR013780 -
Lja1g1464 654 Gene3D - 69 227 - -
Lja1g1464 654 SUPERFAMILY Glycosyl hydrolase domain 526 650 - -
Lja1g1464 654 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 8 653 - -
Lja1g1464 654 SUPERFAMILY (Trans)glycosidases 214 543 IPR017853 -
Lja1g1464 654 Gene3D Glycosidases 228 534 - -
Lja1g1464 654 Pfam Alpha-L-arabinofuranosidase C-terminal domain 460 646 IPR010720 GO:0046373|GO:0046556
Lja1g1464 654 SMART alpha_l_af_c 459 646 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1464 Lja-Chr1 15779373 15783797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1464 21 654 Glycoside Hydrolase AT3G10740 64.409 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1464 K01209 - gmx:100802745 939.488