Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1463 ATGGCTTTCTCAAAGACTTGTTGTGGTTTTCTTTCTCTCTTAGTGGCATGTGATCTTGCCTTTCAATGTTATGTTGCTGATGCTGCTGGAGATCAGACTTCAACACTAACTGTAGATCTTAAATCTGCTGGAAGGCCGATTCCCGAAACTCTCTTTGGAGTATTTTATGAGGAAATTAATCATGCTGGCACCGGCGGATTATGGGCAGAGCTTGTGAACAATAGAGGTTTTGAAGCAGGAGGCACGCAAACTCCATCAAATATTGCCCCTTGGACTATAGTTGGAAAAGAATCCTTAGTTTTGTTGCAAACTGAACTTAGTTCTTGCTTTGAACGCAATAAAGTGGCATTGAGAATGGATGTGCTTTGTGACCAATGTCCTTCTGATGGTGTTGGTGTCTCTAATCCAGGTTATTGGGGCATGAATGTTGTGCAAAAAAAGGAATACAAAGTTGTCTTCTTTGTAAAATCAACGGGGTCGCTGGATATGACAATATCATTTAAAAAAGCAGAAGATGGAGGGATATTGGCTTCTCAAAATGTCAAAGCTTCTGCATCAGAAGTTGCAAACTGGAAAAGGATGGAGCTTAAATTGGTACCCACTGCATCAAATCCTAAGGCAACTCTTCACTTAACAACAACTCAAAAGGGTGTCATATGGTTAGACCAAGTGTCAGCTATGCCCGTAGACACTTTTAAGGGACATGGTTTCCGAACAGACTTGGTCAACATGGTCTTAGAGTTGAAACCAGCCTTTATCAGATTTCCGGGTGGTTGTTTTATTGAAGGACAAACACTTAGAAACGCTTTCCGGTGGAAGGATAGTGTTGGACCATGGGAAGAGAGGCCTGGGCACTTTGGCGATGTTTGGGGTTCGTGGACAGATGAAGGATTAGGTTATTTTGAAGGTCTTCAGCTTGCCGAGGACATTGGTGCAAAGCCAATTTGGGTATTCAACAATGGCATCAGCCATACTGATCAAATTGATACAAGCGTCATCACACCTTTTGTCCAAGAAGCCCTTGATGGTATTGAGTTTGCCAGAGGTCCAGCCACTTCTAAATGGGGTTCTCTTAGAAAATCAATGGGGCACCCAGAGCCTTTTGACCTAAAGTATGTTGCTATTGGAAATGAAGATTGTGGGAAGAAAAACTACCTAGGAAACTACTTAGCATTTTACAATGCTATACGAAAGGCTTATCCTGACATTCAAATGATTTCAAATTGTGATGCTTCTTCCAAGCCATTGGATCACCCAGCTGATTTGTATGATTATCATACATACCCGAATAATCCTTCAAACATGTTCAACAACGCACATGTGTTTGATAAGACGCCCCGCAAAGGTCCAAAGGCTTTTGTGAGTGAATATGCTCTAGTTGGAGACCAACAAGCTAAGCTTGGAACTTTAATAGGAGGTGTCTCTGAAGCTGGGTTCCTTATTGGATTAGAAAAAAACAGTGACCATGTAGCAATGGCTGCGTATGCACCACTTTTTGTAAATGCGGATGATAGGAAGTGGAACCCGGATGCAATTGTTTTTAACTCCAATCAAGTTTATGGAACTCCTAGCTACTGGGTGACACATATGTTTAAAGAGTCGAATGGAGCAACATTTCTTGCCTCAACACTTCAAACACCTGATCCTTCCTCATTTGATGCATCAACAATTCTTTGGCAAAATCCTCAAGATAAGAAAACTTACTTAAAAATAAAGGTTGCAAACTTGGGTAACAATCAAGTGAAACTCGGGATTGTAGTTCACGGACTGGAAAGCTCAAAGATAATTGGGACAAAGACTGTGCTCACATCTAAAAATGCATTAGATGAGAATACCTTCTTAGAACCAAGAAAGATCGTGCCACAACAAACTCCACTTGAGGAAGCAAGCGCAAACATGAATGTTGAACTTCCTCCTCTTTCAAATCTTATAGATCTTGACCGTCTATATAAGACCGCTAGAAATTGCATTTTCATAAATTAA 1983 0.409 MAFSKTCCGFLSLLVACDLAFQCYVADAAGDQTSTLTVDLKSAGRPIPETLFGVFYEEINHAGTGGLWAELVNNRGFEAGGTQTPSNIAPWTIVGKESLVLLQTELSSCFERNKVALRMDVLCDQCPSDGVGVSNPGYWGMNVVQKKEYKVVFFVKSTGSLDMTISFKKAEDGGILASQNVKASASEVANWKRMELKLVPTASNPKATLHLTTTQKGVIWLDQVSAMPVDTFKGHGFRTDLVNMVLELKPAFIRFPGGCFIEGQTLRNAFRWKDSVGPWEERPGHFGDVWGSWTDEGLGYFEGLQLAEDIGAKPIWVFNNGISHTDQIDTSVITPFVQEALDGIEFARGPATSKWGSLRKSMGHPEPFDLKYVAIGNEDCGKKNYLGNYLAFYNAIRKAYPDIQMISNCDASSKPLDHPADLYDYHTYPNNPSNMFNNAHVFDKTPRKGPKAFVSEYALVGDQQAKLGTLIGGVSEAGFLIGLEKNSDHVAMAAYAPLFVNADDRKWNPDAIVFNSNQVYGTPSYWVTHMFKESNGATFLASTLQTPDPSSFDASTILWQNPQDKKTYLKIKVANLGNNQVKLGIVVHGLESSKIIGTKTVLTSKNALDENTFLEPRKIVPQQTPLEEASANMNVELPPLSNLIDLDRLYKTARNCIFIN* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1463 660 Gene3D Glycosidases 210 530 - -
Lja1g1463 660 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 642 - -
Lja1g1463 660 SMART alpha_l_af_c 455 641 IPR010720 GO:0046373|GO:0046556
Lja1g1463 660 Pfam Alpha-L-arabinofuranosidase C-terminal domain 456 641 IPR010720 GO:0046373|GO:0046556
Lja1g1463 660 Gene3D - 531 646 IPR013780 -
Lja1g1463 660 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 1 642 - -
Lja1g1463 660 SUPERFAMILY (Trans)glycosidases 208 539 IPR017853 -
Lja1g1463 660 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1463 Lja-Chr1 15766175 15777962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1463 5 654 Glycoside Hydrolase AT3G10740 59.878 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1463 K01209 - gmx:100780771 1008.82