Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1456 ATGGCTTCCTTCCCTCCTCTCGGTTCACTCACTCTCTGCGAACTCAATCGCGACCTAATCACCGTCGACGCTCTCTCCGACGATCGAGCCAACAGCGCTTACGGAAAACTTCTCGGATTGGTCTTCAGCCCCGTGCCATTTCACCCTCTCGACACCACCGACGATGCTCCCGAACAGGAAGATGGAACTACTGCAACCGCAACCGCAACCGCCGCGGAAATCGTTCCGAGGAAAGGCCCCGCGGCGATCTTGCAAGGATTCGTCAATGACTGCCTCAGGCGCCTCTTTTACCCTAACGATGTGCATTTGTTGCCGGAGGTTAATCTTCAAGGAGTAAGCTGGCACCTGAATAAGCATATAATTGCTTTTATATCTGGGCCAAATCAAGTTCTCGTCCGTGATTATGAGGATTCGGAGGGGAAGGATCCAGTTGTTTTGACCAGCGAGTCTCAGCGAGATGTTAGGGTGCTAGAGTGGAGGCCCAATGGCGGGAGGATGCTTGCCGTGGGTTGCAAGAGTGGAATTTGCATATGGGCTGCTTCTTATCCTGGGAATGCGGCATCTGTTAGATCTGGTGCTACTTCCTTCCTGGGAGGTTTATCTAGAGGGTCAGGAATTCGGTACATCCTGGTTGATTTTCTTCGGAGTCAAAATGATGAGCATGTTAGCGCACTTACATGGAGTCCAGATGGAAGATACTTAGCCACTGCTTCATATGAGAGCTCCTCGTTCACTGTGTGGGATGTTGCTCAAGGTGTGGGGACTCCCATCCGACGGGGATTGGGAGGCATATCAATGCTAAAGTGGTCACCTACTGGAGATTACTTCTTTGCTTCAAAATTCGATGGAACATTTTATCTTTGGGAGACGAACACATGGACATCAGAACAATGGTCATCATCTAGTGGTTTTGTTAAGTGTGCAACATGGGATCCAGATGGGGGAATGATACTGCTTGCATTTTCTGAATCATCAACTTTGGGATCTGTTCATTTTGCATCGAAGCCTCCCTCATTAGATGCACATCTGTTACCTGTTGAATTGCCTGAGATACTATCGTTGACAGGCAGCCAGGGAATTGAAAAGATAGCATGGGATAATTCAGGGGAGCGATTAGCTGTATCTTTTAAAGGTGGAGATGAAATGTACAGGGGTCTGATCGCCGTATATGATACAAGAAGGACTCCTCTGATATCTACATCCTTAATTGGATTTATAAGAGGGCCTGGAGACAATCCAAAGCCAATCTCATTTTCGTTTCACGGGAAGCTTAAACAGGGACCACTGCTTTCTGTGTGTTGGAGCAGTGGATTTTGTTGCACTTACCCCCTCTTATTTCGCTCTCATATGCTTTCATAG 1359 0.4798 MASFPPLGSLTLCELNRDLITVDALSDDRANSAYGKLLGLVFSPVPFHPLDTTDDAPEQEDGTTATATATAAEIVPRKGPAAILQGFVNDCLRRLFYPNDVHLLPEVNLQGVSWHLNKHIIAFISGPNQVLVRDYEDSEGKDPVVLTSESQRDVRVLEWRPNGGRMLAVGCKSGICIWAASYPGNAASVRSGATSFLGGLSRGSGIRYILVDFLRSQNDEHVSALTWSPDGRYLATASYESSSFTVWDVAQGVGTPIRRGLGGISMLKWSPTGDYFFASKFDGTFYLWETNTWTSEQWSSSSGFVKCATWDPDGGMILLAFSESSTLGSVHFASKPPSLDAHLLPVELPEILSLTGSQGIEKIAWDNSGERLAVSFKGGDEMYRGLIAVYDTRRTPLISTSLIGFIRGPGDNPKPISFSFHGKLKQGPLLSVCWSSGFCCTYPLLFRSHMLS* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1456 452 SMART WD40_4 141 179 IPR001680 GO:0005515
Lja1g1456 452 SMART WD40_4 250 289 IPR001680 GO:0005515
Lja1g1456 452 SMART WD40_4 347 391 IPR001680 GO:0005515
Lja1g1456 452 SMART WD40_4 207 248 IPR001680 GO:0005515
Lja1g1456 452 Gene3D - 259 442 IPR015943 GO:0005515
Lja1g1456 452 Pfam WD domain, G-beta repeat 220 248 IPR001680 GO:0005515
Lja1g1456 452 PANTHER ALADIN/ADRACALIN/AAAS 1 451 IPR045139 -
Lja1g1456 452 SUPERFAMILY WD40 repeat-like 108 440 IPR036322 GO:0005515
Lja1g1456 452 Gene3D - 105 258 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1456 K14320 - gmx:100781306 801.971