Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1455 ATGAACCTATTATCAAGTCTCAGATACAGGATCTTCCAATCCACCACCATCTCCTTCTCACCCTTCATCCTCTTCCACCAAAGACGATGGAAGAAACCCACCATTTCAGCTCAAACCCGTTTGGAAGACAGGGTAAGAGACCCCCACCTCGACAACTTCATGACCCACCTCAAAAAACTCTACCTCGTCCTCGGATTCCACAACCTCATGTCGAATCGTAAACGGGGTCCATTCGTTTCCCTTCAGCTCATGTCTCGTTGGAGAAACATCCTCGGACTCAATGTCACTGTCGGGTCCTTCCTCCACAAGTACCCTCATGTTTTCGAGGTGTTTGCGCATCCTTTTAGGAGGAACCCGTGCTGCAGATTCACGAGGAAGATGAAGGAGCTGATTCTCCTGGAAAGGGTTGTTGTGAAGGAGCTGGAGATGGAGGCTGTGAAGAGGGTGAAGAAGCTGCTCATGATGTCTGTGAATGGAACTCTTCGCGTTCACGCGTTGAGGTTGATGAGAAGAGAATTGGGTCTTCCTCAGGATTTCAGGGACTCCATTCTTGGGAAGTACAGTGGTGACTTCAGGTTGGTTGATTTGGAGGTTGTGGCATTGGTTGGATGGGATGATGAATTGGGTACGGCGCAGGTTGAGAAATGGAGGGAGAAAGAGTATACAGAGAAGTGGTTGAGTGAATTTGAGACTAAGTTTGCATTTCCCATTAATTTCCCAACTGGGTTTAAGATTGAGAGAGGGTTTAGAGAAAAGCTGAAGAATTGGCAAAGGCTTCCTTATACAAAGCCTTATGAGAGGAAAGAGGTCATTCGGGTTAGAACTTGTGGAGGGGTGCAGCGATACGAGAAGAGGGCTGTTGCTGTTCTTCATGAGCTTTTGAGCTTGACTGTGGAGAAGATGGTTGAGGTTGATCAATTGGCTCATTTTCGGAGGGACTTTGCGATTGAAGTTAATGTGCGTGAACTACTGCTAACGCACCCGGGGATATTTTACATATCTACTAAGGGAAAGGCTCAAACCGTTTTTCTTAGGGAGGCATATAGCAAAGGGGGTTTGGTTGAGCCTAATCCTGTGTATACTGCTCGGAGGAATATGTTGGACCTTATACTATTAGGTCGGAGGAAAACCAAACAATTTCTAGATTGTGATAGTAAGTCTAAGGAAGAGAGCAATGCTGTAGTATATGAATTAGATGATGAGGGAGTTCAAAGACAAGGAGATTGGGTGATTCCATTCTTGGAGAGTTGTGAGCAGAACAGAACCCCATGA 1272 0.4607 MNLLSSLRYRIFQSTTISFSPFILFHQRRWKKPTISAQTRLEDRVRDPHLDNFMTHLKKLYLVLGFHNLMSNRKRGPFVSLQLMSRWRNILGLNVTVGSFLHKYPHVFEVFAHPFRRNPCCRFTRKMKELILLERVVVKELEMEAVKRVKKLLMMSVNGTLRVHALRLMRRELGLPQDFRDSILGKYSGDFRLVDLEVVALVGWDDELGTAQVEKWREKEYTEKWLSEFETKFAFPINFPTGFKIERGFREKLKNWQRLPYTKPYERKEVIRVRTCGGVQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNVRELLLTHPGIFYISTKGKAQTVFLREAYSKGGLVEPNPVYTARRNMLDLILLGRRKTKQFLDCDSKSKEESNAVVYELDDEGVQRQGDWVIPFLESCEQNRTP* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1455 423 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 13 420 - -
Lja1g1455 423 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 13 420 IPR045040 GO:0003723
Lja1g1455 423 Pfam Plant organelle RNA recognition domain 45 374 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1455 Lja-Chr1 15678802 15680863 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1455 - - gmx:100789857 674.855