Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1453 ATGGCGTATGGAGCATCAGCATGCTTCGCATTCAGCCATGGACCCATTTGCCGTCAACCCATTTCCGAACCCACTCGCCGCCATCTTCAATTGCCTAGGTGCTCTTCGTCTTCGCTCCCCTTCAACAACAACAAATTCTCCACCCTCCCCTTCAACCGCTCTGGACCCGCCTCTTTCACCGGACTACGCTTCCATGATTCTCGCCTCTCTGCCCTCTCCAACGATGGTTCAGGCGGAACAGGTGGTGGCTCTGGGGACTGGTATTCTGGCGGCGGTGGTGGCGACGGCGGTGCTGATGGCGGAGATAAGTGGTCCTTCCTTTCATGGTACTTGGCTCTTCTTGCAAAACATCCTGTTCTAGTAAAGGCTCTAACATCGGCGCTTTTGACACTAATTGGAGATTTGGTTTGCCAGCTTGTGATAGATAAGGTGCAGTCACCGGACTTCAAGAGAACATTCGTCTTCAGTCTGCTTGGTTTTGTGTTGGTGGGTCCAACATTGCATTTCTGGTACTTTTATCTGAGTAAATTGGTAACACTTCCTGGAGCTTCAGGTGCAATTTTGCGGCTTGTAATTGATCAGTTCATATTTTCTCCGATATTCATTGGAGTTTTCTTAGCTAGCTTGGTGACACTGGAGGGAAGCCCATCACTAGTTGTACCTAAGCTTAAACAGGAATGGTTTTCTTCTGTTCTAGCAAACTGGAAATTATGGATACCTTTCCAATTTCTCAACTTTAGATTTGTTCCACAACAATTTCAGGTTCTTGCTGCTAATGTTATTGCTTTAGTATGGAATGTTATTCTCTCATTTAAGGCACACAAAGAAGTTCTTCAAAAATAG 843 0.4626 MAYGASACFAFSHGPICRQPISEPTRRHLQLPRCSSSSLPFNNNKFSTLPFNRSGPASFTGLRFHDSRLSALSNDGSGGTGGGSGDWYSGGGGGDGGADGGDKWSFLSWYLALLAKHPVLVKALTSALLTLIGDLVCQLVIDKVQSPDFKRTFVFSLLGFVLVGPTLHFWYFYLSKLVTLPGASGAILRLVIDQFIFSPIFIGVFLASLVTLEGSPSLVVPKLKQEWFSSVLANWKLWIPFQFLNFRFVPQQFQVLAANVIALVWNVILSFKAHKEVLQK* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1453 280 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 100 275 IPR007248 GO:0016021
Lja1g1453 280 Pfam Mpv17 / PMP22 family 212 270 IPR007248 GO:0016021
Lja1g1453 280 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2 100 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1453 Lja-Chr1 15659197 15663567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1453 106 276 Miscellaneous Gene Families AT2G14860 28.902 1.89e-24 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1453 K13347 - gmx:100790392 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1453 1 15659197 15663567 Lja1g1453 1 15659197 15663567 ECH