Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1446 ATGGTGAATCTGGGATTGTTTTCTTCGAATAAGTCTGTGAGTTCAGTGAAGGTAACCTTTCGGATACCATATTTTACCCAATGGGGTCAGAGCTTGCTGGTGTGTGGTTCTGTGCCATTGCTTGGTTCTGGGAATGTGAAGAAGGGTGTGTTGCTCAGTCCATCTCCTCAAGGGTCTGAGCTCGTGTGGAGCGGAAGCATCACAGTGCCAAGAGGGTTCCAATGCCAGTATAGCTATTATGTTGTAGATGATAACAAAAATATTCTGAGATGGGAGATGGGTAAGAAGCGCGAATTGAACCTTCCTGAAGGTCTTCAGAATGGTCAGGAGGTTGAGTTCCGTGATCTTTGGCAGACTGGCTCAGATGCTCTCCCTTTCAGAAGCGCTTTCAAAGATGTTGTTTTTCGGCAAAGCTGGGATTCGTGCATCACAGGAGTCGATCACACAAATATTGAACCAGAAGCTGAATCAATTGTCGTCCAATTCAAAATATCCTGCCCAAATATTGAGAAAGACACATCATTATGTGTGATTGGTAGCAATACAAAGTTGGGGCAGTGGAAAGTTGAAAATGGACTAAAACTCAACTATTTTGGTGAATCTGTCTGGCTAGCTGAATGTGTGATGCAAAGGAGCGACTTTCCAATAAGATATAGATATTGCAAATATGGCAGGTCTGGGAACTCCTCTATAGAAGATGGTCCGAATCGAGAAGTCTCCATTAACTCCTCAAGGAATGAGGCAAAATATATTTTTCTTTCAGATGGCATGATGCGGGGAACACCTTGGCGTGGTGCTGGTGTAGCCATTCCTATGTTCTCTATTAGGTCGGAATCTGATCTGGGAGTTGGAGAGTTTCTTGATCTTAAATTACTAGTTGACTGGGCGGTAGCATCTGGATTCCATTTAGTTCAACTTTTACCAATCAATGATACATCTGTGCATGGGATGTGGTGGGATTCTTATCCATACAGTTCTCTCTCAGTATGTGCATTGCATCCATTGTACCTGAGAGTCCAGGCACTTTCTGAGAATATACCAGAGGAGATCAAGCAAGAGATTGAGAAGGCAAAACAGCAACTGGATGGGAAGGATGTTGATTATGAAGCTACAATGGCTACTAAACTCTCCATTGCTAAGAAAGTTTTTGCTCAAGAGAAAGATTTGATTCTTAATTTGAGTTCCTTTCTGGAGTTCTTCTCTGAGAATGAGGGTTGGTTGAAACCCTATGCTGCCTTCTGTTTCCTGCGGGACTTTTTTGAAACATCAGAGCGCAGTCAATGGGGTCGTTTTGCTCATTATTCCGAAGATAAACTAGAGAAACTTGTATCCAAGGAAAGTCTGCACTACGAGATAATTAGCTTCCATTACTATGTTCAATACCATCTACATTTACAATTATCAGAAGCTGCAGAATACGCAAGAAAGAAGGGAGTCATTCTAAAGGGAGATCTTCCTATTGGAGTTGATAGAAACAGTGTGGACACCTGGGTTAATCCAAATTTATTCCGAATGAACACTTCTACTGGTGCACCTCCTGATTATTTTGATAAAAATGGACAGAATTGGGGCTTCCCTACTTATAATTGGGAAGAAATGTCAAAAGACAACTATGCTTGGTGGAGAGCTCGATTGACACAGATGGGAAAATATTTTACAGCTTACAGGATTGATCACATATTGGGATTCTTCCGAATTTGGGAACTTCCAGAGCATGCCATGACAGGTCTAGTTGGAAAATTCCGACCATCTATTCCTCTAAGTCAGGAAGAACTTGAAAAAGAAGGAATATGGGACTTTAATCGCCTGAGTCGGCCTTATATTAGGCAGGAAATATTACAGGAGAAATTCGGATCTGCTTGGACATTTGTTGCAACAACTTTTCTGAATGAATATGACAAGAACTGCTATGAGTTCAAGGAGGATAGCAACACAGAGAAAAAAATTGCTTCCAAACTGAAAACTTGTTCAGAAAGTTCTCTTTTGTTGGAGAGTGAGGACAAAATGCGGCGCAATCTCTTTGATCTTTTACAGAATATAGTTCTAATCCAAGATCCTGAGGATCCAAGAAAGTTTTATCCTCGTTTCAACCTTGAAGATACCTCAAATTTTCAGGCTTTGGATGATCACAGCAAGAATGTTCTCAAAAGATTATACTATGACTACTATTTCCACCGTCAAGAGAATCTTTGGAGGCAAAATGCGTTGAAGACCCTGCCTGCACTTCTAAACTCATCTGACATGCTGGCCTGTGGGGAAGATCTGGGCCTCATTCCATCTTGTGTGCATCCTGTCATGCAAGAACTGGGATTAGTTGGTTTGCGCATTCAGCGCATGCCAAATGAATCTGATCTAGAATTTGGTATTCCTTCTCGATACAGCTACATGACTGTGTGTGCCCCATCATGTCATGACTGTTCCCCCATGCGTGCTTGGTGGGAAGAAGATGAAGAGAGAAGACAGCGGTTTTTCAAAGATGTGGTGGAGTCTGATGAGTTGGCTCCCGATCAATGTGTTCCAGAAGTTGCACATTTTATCATAAGGCAACATTTTGAAGCCCCATCAATGTGGGCAATTTTCCCTCTTCAGGACTTGTTAGCATTAAAAGAAGAGTACACAAAACGCCCCGCGGCGGAGGAGACGATCAACGACCCTACAAATCCAAAGCACTATTGGAGATACCGTGTGCATGTAACTCTGGAGTCCTTGCTTAAGGATAATGAGCTCAAAACCAGCATAAAGAATCTTGTACGTTGGAGTGGAAGATCATTTCCTCATGAGGATTCTCAGGTAGAAGCTAGTCCGGTGTCGGCTTCATCAGTAGCAGAAGCTGTCTCTGACAAGAAGATTGCCGGTGCCGCCGACAAGATCCGTCTTCCCTCTGAATCTAATGGAGTTCAACCAAGGGATCATGTGGCTGTCCGGTGA 2928 0.4269 MVNLGLFSSNKSVSSVKVTFRIPYFTQWGQSLLVCGSVPLLGSGNVKKGVLLSPSPQGSELVWSGSITVPRGFQCQYSYYVVDDNKNILRWEMGKKRELNLPEGLQNGQEVEFRDLWQTGSDALPFRSAFKDVVFRQSWDSCITGVDHTNIEPEAESIVVQFKISCPNIEKDTSLCVIGSNTKLGQWKVENGLKLNYFGESVWLAECVMQRSDFPIRYRYCKYGRSGNSSIEDGPNREVSINSSRNEAKYIFLSDGMMRGTPWRGAGVAIPMFSIRSESDLGVGEFLDLKLLVDWAVASGFHLVQLLPINDTSVHGMWWDSYPYSSLSVCALHPLYLRVQALSENIPEEIKQEIEKAKQQLDGKDVDYEATMATKLSIAKKVFAQEKDLILNLSSFLEFFSENEGWLKPYAAFCFLRDFFETSERSQWGRFAHYSEDKLEKLVSKESLHYEIISFHYYVQYHLHLQLSEAAEYARKKGVILKGDLPIGVDRNSVDTWVNPNLFRMNTSTGAPPDYFDKNGQNWGFPTYNWEEMSKDNYAWWRARLTQMGKYFTAYRIDHILGFFRIWELPEHAMTGLVGKFRPSIPLSQEELEKEGIWDFNRLSRPYIRQEILQEKFGSAWTFVATTFLNEYDKNCYEFKEDSNTEKKIASKLKTCSESSLLLESEDKMRRNLFDLLQNIVLIQDPEDPRKFYPRFNLEDTSNFQALDDHSKNVLKRLYYDYYFHRQENLWRQNALKTLPALLNSSDMLACGEDLGLIPSCVHPVMQELGLVGLRIQRMPNESDLEFGIPSRYSYMTVCAPSCHDCSPMRAWWEEDEERRQRFFKDVVESDELAPDQCVPEVAHFIIRQHFEAPSMWAIFPLQDLLALKEEYTKRPAAEETINDPTNPKHYWRYRVHVTLESLLKDNELKTSIKNLVRWSGRSFPHEDSQVEASPVSASSVAEAVSDKKIAGAADKIRLPSESNGVQPRDHVAVR* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1446 975 CDD CBM20_DPE2_repeat2 159 256 IPR034841 GO:2001070
Lja1g1446 975 Pfam 4-alpha-glucanotransferase 270 898 IPR003385 GO:0004134|GO:0005975
Lja1g1446 975 Pfam Starch binding domain 16 107 IPR002044 GO:2001070
Lja1g1446 975 Pfam Starch binding domain 159 248 IPR002044 GO:2001070
Lja1g1446 975 SUPERFAMILY Starch-binding domain-like 156 245 IPR013784 GO:0030246
Lja1g1446 975 Gene3D Glycosidases 263 594 - -
Lja1g1446 975 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 152 265 IPR002044 GO:2001070
Lja1g1446 975 Gene3D Immunoglobulins 149 254 IPR013783 -
Lja1g1446 975 Gene3D Immunoglobulins 8 119 IPR013783 -
Lja1g1446 975 Gene3D Glycosidases 717 923 - -
Lja1g1446 975 SUPERFAMILY Starch-binding domain-like 15 117 IPR013784 GO:0030246
Lja1g1446 975 MobiDBLite consensus disorder prediction 953 975 - -
Lja1g1446 975 PANTHER - 11 923 - -
Lja1g1446 975 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 10 119 IPR002044 GO:2001070
Lja1g1446 975 SUPERFAMILY (Trans)glycosidases 263 916 IPR017853 -
Lja1g1446 975 CDD CBM20_DPE2_repeat1 20 117 IPR034840 GO:2001070
Lja1g1446 975 SMART CBM_20_2 15 111 IPR002044 GO:2001070
Lja1g1446 975 SMART CBM_20_2 157 251 IPR002044 GO:2001070
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1446 1 925 Glycoside Hydrolase AT2G40840 73.792 0.0 1456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1446 K00705 - gmx:100793021 1692.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1446 1 15523490 15533132 Lja1g1446 1 15523490 15533132 ECH