Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1445 ATGAGATTGTTCAAAATGGCTGTAGCCATTGACCAACAACATCATGGATTTAAGCCATTTAGCCGATCCCAGAGATGCAAACTCCAATCCTTTGGTCACCTCGATCACAACATTCTCGAGCTTAGCCACACTAGTTTTTCCCACTCCATTGAACTAGCATTCGAATCCGACAACATTCACCGCAGTTTCTCCACTCCATGCCTGGGACTCACCACACTATCAAGTGAGGACCTCACTTCTCATCATCCTCCTCCAAGGATTGAGATAGTTCGCGGAAGTGGAGCTCCAGTACATGCTCTAGTTGCTGAGGTTGCCATAGCCATGGCCTCTGGTGTTAAACCTGTTCCACTCCCAAGTGGACTAGGCGGTGCCTATGTTTTCAAGAACAAAAGTGGCACCAACATTGCTGTAGCAAAGCCAGTCGATGAAGAACCAGCAGCCCTGAACAACCCAAACAGCTTAATGGGTCAAATGCTGGGGCAACAAGGGTGGAAGCATTCAATTAGAGTAGGTGAAACTGGAATCAGAGAACTAGCTGCTTATCTTCTTGATCATGGAGGATTTGCTGGTGTGCCTCCAACCGCTTTAGTAAAATTCTCTCATGCTGAATTCTCTGCTGCTACTGACAATGCTTCTGCAGAAGCAGCCACAGTACCTAAACTTGCCTCACTCCAACGCTTTATTGGCCATGTCCACCAGATTGGAATTTTGGACATTAGGCTCTTGAATCTTGACAGACATGCTGGTAACATGCTTGTGATGAAACATGACCACAAAAGCTATGCTAAATCTGAACTCGAATACATTTCGAAGCTTGATCCTTTCAAAGACGCTGAAATCCTGAGGACTGAGGTCCCTTCTTTGAGGGAGTCCTCCGTTCGTATGATGACCAGGGGGTTTTGTGGCGATGAAGAGACAACAAGTGAACTTGAAAAGATTAGTTTGCAAGTCAAGGCTAGTAGCACCCCTCATGTTTCAAGCAATGAGGATAATAGCAAGGAAGGAACTGAAGGAGAGGAGGCCAAATCTGGAGTTTCTTTTGGAGACCTTAACCAAGGAGAATGGGAATCGTTCTTGGAGAGTTTTAACAAGTTTGTGCCTGAAGTTTTTGAGGATAAGAAGTGCAAGAATCGTTGA 1137 0.4547 MRLFKMAVAIDQQHHGFKPFSRSQRCKLQSFGHLDHNILELSHTSFSHSIELAFESDNIHRSFSTPCLGLTTLSSEDLTSHHPPPRIEIVRGSGAPVHALVAEVAIAMASGVKPVPLPSGLGGAYVFKNKSGTNIAVAKPVDEEPAALNNPNSLMGQMLGQQGWKHSIRVGETGIRELAAYLLDHGGFAGVPPTALVKFSHAEFSAATDNASAEAATVPKLASLQRFIGHVHQIGILDIRLLNLDRHAGNMLVMKHDHKSYAKSELEYISKLDPFKDAEILRTEVPSLRESSVRMMTRGFCGDEETTSELEKISLQVKASSTPHVSSNEDNSKEGTEGEEAKSGVSFGDLNQGEWESFLESFNKFVPEVFEDKKCKNR* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1445 378 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 261 296 IPR044571 -
Lja1g1445 378 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 6 261 IPR044571 -
Lja1g1445 378 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 261 296 - -
Lja1g1445 378 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 6 261 - -
Lja1g1445 378 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 339 377 IPR044571 -
Lja1g1445 378 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 339 377 - -
Lja1g1445 378 MobiDBLite consensus disorder prediction 316 348 - -
Lja1g1445 378 Pfam Phosphatidylinositol 3- and 4-kinase 121 256 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1445 Lja-Chr1 15519442 15520815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1445 6 337 Acyl Lipid Metabolism Gene Families AT2G40850 46.024 2.76e-98 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1445 - - gmx:100809677 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1445 1 15519442 15520815 Lja1g1445 1 15519442 15520815 ECH