Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1436 ATGGCAGAGGAAAACGTTCAAGGCAATGACAAGATGATCGAGAAAGAGGAGGAGCTAGACTGTAACAAGGGGAAGCAGCATCGACGAGGAGGCATCAAAACTTTACCTTTCATCCTTGCAAATGAATGGTGTGATAAATTTGCGAGTGCTGGTTTTCATGCGAACATGATAAGCTATCTTACTCAACAGCTGCATATGCCAATGGTATCTGCCTCCAACACTCTCAACAACTTCAGTGGAACATCTAGCTTCACTCCTCTTCTTGGTGCTTTCTTAGCTGATTCCTACATTGGCAGATTTTGGACCATTCTTATCTCCACTCTCGTCTATCAACTGGGATTGGTTATTATAACAACATCAGCTATATCACCTCATTTCCACCCTCCACCATGTCCAACACAAGTGAATTGTCAAGAAGCCACGTCCTTACATCTGTGGATACTCTACATCTCTTTGTTCTTCATATCTGTTGGAACAGGTGGAATTAGATCTTGTGTTGTGCCTTTTTCAGCAGACCAATTTGACATGACCAAAAAGGGTGTTGCAAGTAGAAAGTGGAACCTCTTCAATTGGTACTTCTTCTGCATGGGAGGGGCTTCTCTAAGTGCTTTGACCTTTGTGGTCTATGTTCAAGACAATTTGGGATGGGGCTGGGGCCTTGGCATTCCAACCATTGCCATGTTGATATCAATATTTGCCTTTGTGTTGGGTGCACCACTCTATAAGAATGTGAAGCCAGAAGGGAACCCTTTGGTTCGTTTAGCCCAAGTGATTGTGGCAGCTGTGAAGAAGAGGAATGAGGCTTTGCCACAGGATCACAGTCTCTTATATCAAAATAAGGAGCTTGATGATGCTATTTCTTTGGAAGGAAAGCTTTTACACTCAGACCAATTAAGATGCCTGGACAAGGCTGCAATTGTATCAGAGGAAGAAGCCAGAGATCCAAATGCACAACCAAACTTATGGAACATAGCCACTGTCCACAGAGTTGAGGAGTTAAAATGTCTCATTAGAATGCTTCCTATTTGGGCATCAGGAATTTTGCTCAAAACAGCAACTTCACACCAGCAAACCTTTGTCATTCTACAGGCTCGTACAATGGACCGCCATCTCTCTAACTCATTCCAAATCCCCCCTGCAAGCATGGCCATCTTCAATGTCCTTACCATGATGGCAGGTGTTGTTGTCTACGAACGCGCTTTCGTTCCTTTTGCTCGAAGGTTCACCAGGAACCCTACTGGAATCACATGCCTGCAGAGAATGGGAATTGGCTTTGTGTTCAACATTGCAGCCACAATGGTTTTAGCTCTGGTTGAAATCAAAAGAAAAGCAGTTGCTGCTAAATACCATTTACTAGATGATCCAAATGCTACTATCCCCATTAGTGTGTTTTGGTTGGTACCTCAGTATTGTCTACATGGGGTGTCTGAAGTTTTCTTCTTTGTTGGACATTTGGAATTTCTCTATGATCAATCACCTGAAACTATGAGAAGCAGTGCTACAGCTTTGTATAGCATAGCTACAGCCATTGGCCACTATGCTGGTAGTGTTCTTGTAACACTGATCCATAACTATAGTGGTAAGGAAAGGAATTGGTTGCCTAATAGGAACCTCAACAGGGGAAGGCTTGAGTACTATTACTTTCTTGTTAGTGGGATTCAAGTTGTGAATCTCATTTATTATGTGATCTGTGCTTGGTTTTACACTTACAAGGCATTGGATGAAATTAGTGAACCAAACATGGAAGTGGAGTTGGAACAGGCTGATGAAGAAAGCTCATTTATCAATTTAGAAAATAGTAGGAAGACAGAAAAAAGAGAATTTACAAAGGATGATTGA 1839 0.422 MAEENVQGNDKMIEKEEELDCNKGKQHRRGGIKTLPFILANEWCDKFASAGFHANMISYLTQQLHMPMVSASNTLNNFSGTSSFTPLLGAFLADSYIGRFWTILISTLVYQLGLVIITTSAISPHFHPPPCPTQVNCQEATSLHLWILYISLFFISVGTGGIRSCVVPFSADQFDMTKKGVASRKWNLFNWYFFCMGGASLSALTFVVYVQDNLGWGWGLGIPTIAMLISIFAFVLGAPLYKNVKPEGNPLVRLAQVIVAAVKKRNEALPQDHSLLYQNKELDDAISLEGKLLHSDQLRCLDKAAIVSEEEARDPNAQPNLWNIATVHRVEELKCLIRMLPIWASGILLKTATSHQQTFVILQARTMDRHLSNSFQIPPASMAIFNVLTMMAGVVVYERAFVPFARRFTRNPTGITCLQRMGIGFVFNIAATMVLALVEIKRKAVAAKYHLLDDPNATIPISVFWLVPQYCLHGVSEVFFFVGHLEFLYDQSPETMRSSATALYSIATAIGHYAGSVLVTLIHNYSGKERNWLPNRNLNRGRLEYYYFLVSGIQVVNLIYYVICAWFYTYKALDEISEPNMEVELEQADEESSFINLENSRKTEKREFTKDD* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1436 612 Gene3D MFS general substrate transporter like domains 4 575 IPR036259 -
Lja1g1436 612 Pfam POT family 100 532 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja1g1436 612 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 89 113 IPR018456 GO:0006857|GO:0016020|GO:0022857
Lja1g1436 612 SUPERFAMILY MFS general substrate transporter 43 576 IPR036259 -
Lja1g1436 612 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 19 583 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja1g1436 612 PANTHER NITRATE TRANSPORTER 1 19 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1436 Lja-Chr1 15382735 15386778 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1436 40 598 Organic Solute Cotransporters AT1G68570 54.545 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1436 - - aprc:113861571 946.036