Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1433 ATGTCTACCTCTCCATTCACCTCCTTTCTCACACTCTCAACCCAGTCACCTTCAAAGCTCTCACCTGTTCGCACATTCAGAGCCTCAGCTTCTTCTGACTCAGTTCCTGCAACAAGAAGCTACCAACTCATACCACCCAGAAGAGAATTCTTGAAGGGTATTGCGTTGGGGGCACTTCCACTTGTTCTCCTCAGAGAAACACCACCACCTGCAGAAGCTAGAGACGTTGAAGTTGGCTCCTTCCTCCCACCTTCACCAGCAGACCCATCTTTCGTTCTCTTCAAGGCTTCTCCTAAGGACACCCCTGCCCTTCGAGCAGGAAATGTGCAGCCATACCAGTTTATTCTCCCCCCAACTTGGAAACAGACACGAATAGCAAACATATTATCTGGAAATTACTGTCAGCCAAAATGTGCTGAGCCTTGGGTGGAGGTTAAATTTGAAGATGAAAAACAAGGAAAAGTCCAGGTTGTGGCTTCACCTTTGATACGCCTAACCAACAAACCAAATGCAACAATTGAGGACATTGGGAGCCCAGACAAAGTGATTGCATCTCTTGGGCCATTTGTCACCGGAAGCACGTATGATCCGGATGAGCTTATTGAGACTTCAGTTGAAAAGCTTGGTGATCAGACGTACTACAAATATGCGCTTGAAACTCCATATGCTCTTACGGGTTCACATAATCTAGCAAAAGCAACAGCAAAGGGAAACACTGTTGTTTTGTTTGTGGCTAGTGCCAATGACAAGCAGTGGCAAACTTCTCAGAAGACTCTAAAGGCCATGCTTGATTCCTTTGTGGTGTAG 807 0.4634 MSTSPFTSFLTLSTQSPSKLSPVRTFRASASSDSVPATRSYQLIPPRREFLKGIALGALPLVLLRETPPPAEARDVEVGSFLPPSPADPSFVLFKASPKDTPALRAGNVQPYQFILPPTWKQTRIANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKPNATIEDIGSPDKVIASLGPFVTGSTYDPDELIETSVEKLGDQTYYKYALETPYALTGSHNLAKATAKGNTVVLFVASANDKQWQTSQKTLKAMLDSFVV* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1433 268 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 89 268 - -
Lja1g1433 268 SUPERFAMILY Mog1p/PsbP-like 107 267 IPR016123 -
Lja1g1433 268 Pfam PsbP 111 268 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lja1g1433 268 PANTHER - 36 267 - -
Lja1g1433 268 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 6, CHLOROPLASTIC 36 267 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1433 - - gmx:100813771 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1433 1 15334797 15341123 Lja1g1433 1 15334797 15341123 ECH