Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1431 ATGGATTCTTCATCATCATCATCATCATCATCAACCTGTGTCCCCAACGATGCTGCAGCTTCTGGGTTCAAAGACAAGGAGTCAATGGTTGACCCTTTCTTGGTCGAGGCTCTCCAGAACCCTCGTCATCGTCTCACCATTTTGCGGATGGAGCTGGATATTCAGAGCTTTATGAATAATGCTGATCAGCAGCATTTTGAGTTCCAGCATTTCCCTTCTTCCTATCTCCGACTGGCTGCACATCGTGTTGCTCAACACTATGGTATGCAAACAATGGTTCAGGATTGTGGCTTAGATGGCCAGGGAAGTAAAATTCTGGTGAGGAAGTTACCGGAAAGCAAATATCCTGCAGTTTGTTTATCTGAAATACCTGCCAAACAGGTGGAAAATGATAAATGTTTCCAGAAAAAAATTGTAATTAGACCTAGGCCTGGTAAAGCTGGTTTGAATGATGGCAATGGTTCTGGGGTGAAAGGAAACCATCTGAGGAGTGTGGAAGAGAGGAAGGAAGAATATGATCGGGCACGAGCACGTATCTTTAGTGGCTCTAGAAGCTCCGATTCAGGTGATACCTTATCTGTGGTCCCCATGGATGGGCAAAGTTCTTTTATGAGCAGGGATGAGTATGAGACTAGAAAAAACCCCATGGCTGATTCAGAAAGAATCATGAGTGTCAAGGATGCTAATGCTACTCGAGTTGCCATTTTCAGAGACAGGGAAAAGGACCGAAGTGATCCAGATTATGACCGCAGCTATGGAAGGTATGCTAGGAGTATGTCAATGCCTGCCGTTAACTTGGTGCCTTTTAATGTGCAAATTACCCAACCTTCATTTGCTCAATATGACACTACTTTCAATCAGTTGGTTCAGATGCCACCAACTCAGGCTTCACTTGGCTATATACCTCCTTCAAGTCCGATCATGAGCCCTTTCTGTAATGGGGGATTGAATCAGACACCTAGGGATCCTGCTTACCTACAGTGGCCAAGTCCTACTATAATGTATGCACATTCATATGACCAATTTAGACATGCTGTTTACCAGGCTCCATTTGGTCAACAGCCCTTGAGCTTTGACTATTCACAGAACTACTAG 1095 0.4438 MDSSSSSSSSSTCVPNDAAASGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQSFMNNADQQHFEFQHFPSSYLRLAAHRVAQHYGMQTMVQDCGLDGQGSKILVRKLPESKYPAVCLSEIPAKQVENDKCFQKKIVIRPRPGKAGLNDGNGSGVKGNHLRSVEERKEEYDRARARIFSGSRSSDSGDTLSVVPMDGQSSFMSRDEYETRKNPMADSERIMSVKDANATRVAIFRDREKDRSDPDYDRSYGRYARSMSMPAVNLVPFNVQITQPSFAQYDTTFNQLVQMPPTQASLGYIPPSSPIMSPFCNGGLNQTPRDPAYLQWPSPTIMYAHSYDQFRHAVYQAPFGQQPLSFDYSQNY* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1431 364 Gene3D - 20 143 IPR036867 GO:0003676
Lja1g1431 364 Pfam R3H domain 46 95 IPR001374 GO:0003676
Lja1g1431 364 PANTHER OS05G0411600 PROTEIN 16 363 - -
Lja1g1431 364 ProSiteProfiles R3H domain profile. 44 111 IPR001374 GO:0003676
Lja1g1431 364 SMART R3H_4 28 110 IPR001374 GO:0003676
Lja1g1431 364 SUPERFAMILY R3H domain 19 134 IPR036867 GO:0003676
Lja1g1431 364 CDD R3H_encore_like 43 109 - -
Lja1g1431 364 Pfam SUZ domain 135 183 IPR024771 -
Lja1g1431 364 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 16 363 - -
Lja1g1431 364 MobiDBLite consensus disorder prediction 144 168 - -
Lja1g1431 364 ProSiteProfiles SUZ domain profile. 114 184 IPR024771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1431 Lja-Chr1 15311961 15316459 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1431 - - lja:Lj1g3v4093200.1 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1431 1 15311961 15316459 Lja1g1431 1 15311961 15316459 ECH