Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1427 ATGACAAAGATTAGTCCTGAAATTGAAATCAAGATGCCAATGGAAGCAGTTCCGCCAGTTTCAGCTGATGTGAGCTTTATTTCTGATAGGTTTCCAAAGTATAAACTTGGAGCTGATAGCCAAATTCTGGAAGAGACTGTAGAGGATAACCAGGGTCCTTCATTGAAGGATGTTATTGAACAAGAAGCTACCAATTTGTCAGACCAGCACAAGCGCATCTCAGTTCGTGACCTTGCCTGTAAATTTGATAAGAACTTGGCTGCAGCTGCTAAGTTGTCTAATGAGGCAAAGATAAGAGAGGTGGCATCTTTGGAGGGACATGTTCTTTTGAAGAAGCTAAGAGATGCTTTAGAATATTTAAGAGTCCGTTTTGCAGGAAGAAATAAAGAGGATGTGGAGAAAGCTATCTCTATGGTTGAAGCTTTAGCAGTAAAGTTGACTCAAAATGAAGGAGAATTGATTCAAGAGAAATTTGAAGTGAAGAAGCTTTTGAACTTTCTCAAACAGGCTTCTGAAGATGCTAAAAAGTTGGTTAATCAAGAGAAGTCTTTTGCTTGTGCTGAAATTGAGAGTGCTAGGTCAGTTGTGCTGAGAATTGGGGAGGCACTCGAGGAACAAGAACAAGATTCCCAAGCTTCTAAACCGCAGGATGTGGATGGACTAGTAGAAGAGGTTCAAGAGGCTAGAAGAATCAAACTGTTGCATCAGCCAAGCAAGGTTATGGCAATGGAGTATGAACTTCGTGCTCTAAGGGATCAAATTCGAGAAAAATCTATATTTTCAATTAAGCTTCAGAAAGAGCTAACAATGAGCAAGAGGGATGAGGAGAATAAATCTCATCCGTATATGTTACATGGTTCTGAAGCTTTGGGTTCATATCTGAAAGTCCAGCCTCGCTCGGGTGAAGTGCCACAGGTTTCAAAATGTTCATTTCAGTGGTACCGCTTGTCATCTGAAGGAAGCTGGAGGGAAGTTATTTCAGGTGCCGACAAATCAATATATGCTCCTGACCCCTTTGACGTTGGGAGAATCTTACAAGTGGACATTGTCTCTAATGGCAAAAAACTCACACTAACTACTAATCCCATTCAAACTGCTTCAGGACTTGGAAGCCATGTGGAGGCACTTCTACGAAAATCTAATACTGATTTTCATGTGGTTATCTCTCAGATGAATGGAAAAGATCACTCATCACGTTCTACTCATTCATTTAATGTGGGGAGAATGAGGATAAAGCTATGTAGAGGTTGGATTACAAAAGCTAGAGAGATTTACTCCCCATCAATGCAGCTATGTGGAGTTAGAGGGGATGCCAGCAATGCAGCGAAGGCACTGTTTTGGCAAGCTCGAAAGGGCCTATCATTTGTGTTAACCTTTGAATCAGAGAAAGAAAGAAATGTAGCCATCATGATTGCCAGAAAATATGCTCTTGATTGCAATGTGGTGCTTGCTGGACCAGATGATCTAGTGTAG 1473 0.4114 MTKISPEIEIKMPMEAVPPVSADVSFISDRFPKYKLGADSQILEETVEDNQGPSLKDVIEQEATNLSDQHKRISVRDLACKFDKNLAAAAKLSNEAKIREVASLEGHVLLKKLRDALEYLRVRFAGRNKEDVEKAISMVEALAVKLTQNEGELIQEKFEVKKLLNFLKQASEDAKKLVNQEKSFACAEIESARSVVLRIGEALEEQEQDSQASKPQDVDGLVEEVQEARRIKLLHQPSKVMAMEYELRALRDQIREKSIFSIKLQKELTMSKRDEENKSHPYMLHGSEALGSYLKVQPRSGEVPQVSKCSFQWYRLSSEGSWREVISGADKSIYAPDPFDVGRILQVDIVSNGKKLTLTTNPIQTASGLGSHVEALLRKSNTDFHVVISQMNGKDHSSRSTHSFNVGRMRIKLCRGWITKAREIYSPSMQLCGVRGDASNAAKALFWQARKGLSFVLTFESEKERNVAIMIARKYALDCNVVLAGPDDLV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1427 490 Pfam Coiled-coil regions of plant-specific actin-binding protein 101 268 IPR032009 -
Lja1g1427 490 Gene3D - 269 364 - -
Lja1g1427 490 Coils Coil 160 180 - -
Lja1g1427 490 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 1 1 488 IPR039640 GO:0003779|GO:0007015|GO:0010119
Lja1g1427 490 Pfam PH domain of plant-specific actin-binding protein 381 488 IPR041144 -
Lja1g1427 490 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 3 1 488 - -
Lja1g1427 490 Pfam Ig domain of plant-specific actin-binding protein 282 378 - -
Lja1g1427 490 Gene3D - 366 490 - -
Lja1g1427 490 Pfam Actin-binding domain of plant-specific actin-binding protein 55 97 IPR032012 GO:0003779
Lja1g1427 490 Gene3D - 101 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1427 Lja-Chr1 15272815 15282429 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1427 - - var:108345859 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1427 1 15272815 15282429 Lja1g1427 1 15272815 15282429 ECH