Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1412 ATGCAGAAGATTGTGCGAAATAGGAGATTCTTGAATCTTCCACCAGTTCTAACACTGCCACACTTGTCGCAATCTGCAGTGGACACAGCTCGCGGCGTTGAATCTCTTGATTTTCGGGAAATCATAAACACAAGCGAACTTAGAAGTGCATTTGACAAATTCAATCTAAAAGGTTTGTCTGGATGCCTGAACTGGACTTCGAGGAGAAATGATAAGAGTCATGCTGCCTGCTATGTGATAAATCGCCATTTTATATCTGATCACAATGATAGATGCGCAAAAGAGTTCTCAAGTAAGCTCCTTAAAAGTATTCCAGACTTTGTAAAGATAGTGGAGGTTGGTCCAAGGGATGGATTACAAAATGAGAAGGTTACTGTTCCTACCGATGTAAAAGTTGAATTGATAAAACTGCTAGTTTCTTCTGGGTTGTCTGTTGTTGAGGCGACTAGTTTTGTCTCACCAAAATGGGTGCCCCAGTTGGCAGATGCAAAGGATGTATTGGCAGGAATTCAAAATGTTGAAGGTGCTAGATTTCCTGTCTTAACTCCAAACCTCAAAGGTTTTGAGACAGCTGTTGCTGCTGGAGCTAAGGAAGTCGCTGTTTTTCCTGCAGCATCTGAATCATTCTCTAAAGCAAATCTGAATTGTGGCATTGAGGATAATCTCACTCGTTGCCGTGACATTGTTTTAGCTTCTAGAAGCCTCTCGATCCCAGTCCGTGGATATATATCTTGTGTTGTGGGATGTCCTCTGGAAGGAAAAATTGCTCCAACAAAAGTAGCTTACGTGGCAAAATCACTTTATGAGATGGGGTGCTCGGAGATTTCACTAGGGGATACAATTGGTGTTGGCACACCTGGTACGGTCATTCCAATGCTTGAAGCTGTTCTTGATGTTGTTCCTGCTGACAAGCTTGCTGTCCACTTTCATGATACTTATGGTCAGGCACTTTCAAATACTCTCGTTTCACTGCAGATGGGGATCAGCACTGTGGATTCATCTGTCTCTGGTCTTGGAGGTTGTCCATACGCCAAGGGTGCAACTGGGAATGTTGCCACCGAGGATGTTGTTTACATGCTGACCGGGCTCGGAGTGAAAACCAATGTGGACCTTGGAAAGCTTATGCTGGCTGGGGATTTCATCTGCAAGCATTTAGGGCGTGCATCAGGTTCAAAAGCTGCAACTGCCTCGAGTAAAGTTACAAATCATGCCTCCAAACTGTGA 1224 0.4404 MQKIVRNRRFLNLPPVLTLPHLSQSAVDTARGVESLDFREIINTSELRSAFDKFNLKGLSGCLNWTSRRNDKSHAACYVINRHFISDHNDRCAKEFSSKLLKSIPDFVKIVEVGPRDGLQNEKVTVPTDVKVELIKLLVSSGLSVVEATSFVSPKWVPQLADAKDVLAGIQNVEGARFPVLTPNLKGFETAVAAGAKEVAVFPAASESFSKANLNCGIEDNLTRCRDIVLASRSLSIPVRGYISCVVGCPLEGKIAPTKVAYVAKSLYEMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPADKLAVHFHDTYGQALSNTLVSLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLTGLGVKTNVDLGKLMLAGDFICKHLGRASGSKAATASSKVTNHASKL* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1412 407 ProSiteProfiles Pyruvate carboxyltransferase domain. 108 375 IPR000891 GO:0003824
Lja1g1412 407 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 35 407 - -
Lja1g1412 407 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 35 407 IPR043594 GO:0016833
Lja1g1412 407 Gene3D Aldolase class I 101 400 IPR013785 -
Lja1g1412 407 CDD DRE_TIM_HMGL 110 383 - -
Lja1g1412 407 SUPERFAMILY Aldolase 103 392 - -
Lja1g1412 407 Pfam HMGL-like 108 380 IPR000891 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1412 Lja-Chr1 15047508 15054067 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1412 K01640 - gmx:100801507 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1412 1 15047508 15054067 Lja1g1412 1 15047508 15054067 ECH