Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1409 ATGATAAGCGCTTCTGACTTGTACCATGTTCTCACTGCGGTGGTGCCACTCTACGTGGCTATGATCCTCGCCTACGGCTCAGTGAAATGGTGGAAAATCTTCAGTCCAGACCAGTGCTCTGGCATCAACCGTTTTGTTGCTCTGTTCGCAGTTCCTCTGCTTTCCTTCCACTTCATCTCCACCAACAACCCCTACGCCATGAACTACAGGTTCATCGCTGCTGATTCTCTTCAGAAAACCATAGTCCTTGCAGTTCTGCTAATCTGGTCAAGAACAAGCTCAAGAGGCTCTCTGGAATGGTCCATCACTCTGTTTTCCCTGTCAACACTGCCCAACACTCTGGTCATGGGGATTCCATTGCTGAAGGGGATGTATGGTGATGCATCAGGGACATTGATGGTGCAAATCGTGGTGCTTCAGTGTATCATCTGGTACACTCTGATGCTGTTCTTGTTTGAATACAGAGGAGCCAGGCTTCTCATTGTGGAGCAGTTTCCTGACACTGCAGGGTCGATTATCTCGTTCAAGGTGGATTCTGATATTCTCTCGCTTGATGGGAAAGAGCCTCTGCAGACTGAGGCTGAGGTTGGAGAAGATGGAAAGCTTCATGTTACTGTCAGGAAATCTACCAGCTCACGCTCTGAGATTTTCTCTCGGCGTTCTCATGGACCAAACTCTGGTGTTTCACTCACTCCTCGTCCTTCAAACTTGACCAATGCTGAGATTTACTCTCTGCAATCTTCCAGGAATCCAACTCCAAGAGGGTCTAGCTTCAACCACACTGATTTCTACTCCATGGTGAATGGGAGAAACGTGAGTCCGAGGCAGAGTAACTTTGGTGGAACCTTGGGTTTTGATGAGGAAAGTGGAATGGGTAAGGCTAATGGTGGTGGTGGCGGTGGTGGGTACCCTGCTCCTCACAATGCAGGGATTTTTTCTCCGGTGACCGGCAAGAAGAAGGCCAACGGTGGCGGCGCTGATGGCGGCGGAGGAAAGGATCTTCACATGTTTGTTTGGAGTTCAAGTGCTTCCCCTGTTTCTGAAGGTGGAATCCATGTCTTCAGAGGTGCTGATTATGGGAATGACCAGCTTGGTGGGGTAGCTTCACACCAAAAAGATTATGATGAGTTTGGTCACGATGAGTTTAGCTTCGGAAACAGAACTGTTGCTAATGGTGTGGACAAGGAAGGACCTGTGTTGTCTAAGCTTGGTTCAAGCTCCACCACTGAGCTTCACCCAAAAGCACAGGGAGAATCCAAAACTGCCACCAACATGCCACCTGCTAGTGTCATGACTAGGCTCATTTTGATCATGGTGTGGAGAAAGCTGATTAGGAATCCTAACACTTACTCTAGCCTTATTGGTCTCACTTGGTCTTTGGTCTCATTCAAGTGGAATGTTGTTATGCCAGCAATTGTTGCTAAATCAATATCAATTCTATCTGATGCAGGCCTTGGAATGGCAATGTTTAGTCTTGGGTTGTTCATGGCGTTGCAGCCAAAGATCATTGCTTGTGGAAACTCGGTTGCTGCATTTACTATGGCAGTTCGGTTCCTCACTGGCCCTGCAGTCATGGCCGTTGCTTCAATTGTTGTAGGGCTCAGGGGTGTTCTGTTGCACATAGCTATTGTACAGGCTGCTCTGCCTCAAGGAATTGTCCCATTTGTGTTTGCTAAGGAATACAATGTTCATCCTGACATTCTCAGCACTGGGGTTATATTTGGAATGCTGATTGCTCTTCCCATTACTCTTGTTTACTACATTTTGCTGGGGCTTTGA 1779 0.4767 MISASDLYHVLTAVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNYRFIAADSLQKTIVLAVLLIWSRTSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDASGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAGSIISFKVDSDILSLDGKEPLQTEAEVGEDGKLHVTVRKSTSSRSEIFSRRSHGPNSGVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNGRNVSPRQSNFGGTLGFDEESGMGKANGGGGGGGYPAPHNAGIFSPVTGKKKANGGGADGGGGKDLHMFVWSSSASPVSEGGIHVFRGADYGNDQLGGVASHQKDYDEFGHDEFSFGNRTVANGVDKEGPVLSKLGSSSTTELHPKAQGESKTATNMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFKWNVVMPAIVAKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVAAFTMAVRFLTGPAVMAVASIVVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1409 592 MobiDBLite consensus disorder prediction 213 235 - -
Lja1g1409 592 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 592 - -
Lja1g1409 592 TIGRFAM 2a69: auxin efflux carrier 1 592 IPR014024 -
Lja1g1409 592 Pfam Membrane transport protein 9 587 IPR004776 GO:0016021|GO:0055085
Lja1g1409 592 MobiDBLite consensus disorder prediction 401 423 - -
Lja1g1409 592 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1 592 - -
Lja1g1409 592 MobiDBLite consensus disorder prediction 395 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1409 Lja-Chr1 15011529 15014295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1409 1 583 Organic Solute Cotransporters AT1G73590 65.931 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1409 K13947 - gmx:100820506 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1409 1 15011529 15014295 Lja1g1409 1 15011529 15014295 ECH