Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1398 ATGTCTCTCCACAAGAACTCTCTACCAAAATTTGAGAAACAAGAAGACTGTAAGATTTCTCTCTTGGATTTGCCAGGGTGTATCTTGGATGTCATTCTTGAGCTCCTTCCACCATCAGATTTGTGCAGGGTAGCACAAGTGTGTACTTATTTGAGAAACAGAAGCAGAAGTGATAATTTTAACCTAATTGGTGATGTTGCTCTTCAAGAGTGGCAGTGGCATACAACAAAGATAAACACACAAAGTATCTTGCTGCTGCAAAATCAAAGTAGAGGATCATGTGGCTCTTTTAGTGGTGTTTGGCCTTCTCTAAGCCTTAATTCTTATTTGAAAAATTTTGGGGACATCACTAGTTTATTTCAAAATTGTCCCAAAATGGCTCTGTTTGTTTGTCTTGAGAGTGGTCGCTTCTGGTTTCCTGCTCAAGCTTATCTTAAGAGAATGCCACTATATTTTTATGATGTCATTGTTAGTTATAACTCTGAAACAGACACCTTCAGAGCAAGGTCCCCAAACAACGAGTGGCGAATGATTGGGAGAAACATTGAGTGGGATAGGTTGAGATCATCACCAGCTGAGAATTTTTCAAGGAAATTTTATATGTCTAATAAGAATGATTTGAAGCCAGGGGATCATATTGAGATTCAAAGGAGAAAACGTAGAGAATGCCCTTATGGTAATTAA 684 0.383 MSLHKNSLPKFEKQEDCKISLLDLPGCILDVILELLPPSDLCRVAQVCTYLRNRSRSDNFNLIGDVALQEWQWHTTKINTQSILLLQNQSRGSCGSFSGVWPSLSLNSYLKNFGDITSLFQNCPKMALFVCLESGRFWFPAQAYLKRMPLYFYDVIVSYNSETDTFRARSPNNEWRMIGRNIEWDRLRSSPAENFSRKFYMSNKNDLKPGDHIEIQRRKRRECPYGN* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1398 227 Gene3D - 8 91 - -
Lja1g1398 227 Pfam F-box domain 21 61 IPR001810 GO:0005515
Lja1g1398 227 SUPERFAMILY F-box domain 11 59 IPR036047 GO:0005515
Lja1g1398 227 PANTHER ESTS AU081301(E20138) 5 225 - -
Lja1g1398 227 PANTHER F-BOX PLANT-LIKE PROTEIN 5 225 - -
Lja1g1398 227 ProSiteProfiles F-box domain profile. 18 53 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1398 Lja-Chr1 14884485 14886444 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1398 - - gmx:100795992 277.33