Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1395 ATGGAGGAAGATCACATTGACAGATCTCTCTTGAATTTGCCTGAACCCATTCTGGATTGCATCCTCAAACTCCTCTCACCAATCGAGCTCATCAAAATGTCCATGGTGTGCACTTGTTTAAGGGATGCATGTCGAAGTGATCATTTGTGGGAAAACCACATCAACCAGAAATGGGGTACAATCGTTGGTGATTTTGCTTTCAAAGAGTGGCAATGGCACTTAACAAAATTCAAGTCAGAAGAAGAAGAAGAAGAAGCCCTCTTGGATCAAAATTGCTCACTTGGGTCTTTCTGTGGGTCTTGTCCTTTGCCATGCACTGGCTCATATTTACAGGATTTTAATCAACTTAGGACCTTCTTGCCAAATAACTCCATGTTGGCTCTTTATTTCTCTCTACAGGGTGGCAAGTTTTGGTTTCCAGCTCAATTTTACCGGGGACCAAGGGTTCGAGACGCCTTATTTCGCTATGACTCCACAAGTCAAACCTTCACAGCAAGGTAA 501 0.4311 MEEDHIDRSLLNLPEPILDCILKLLSPIELIKMSMVCTCLRDACRSDHLWENHINQKWGTIVGDFAFKEWQWHLTKFKSEEEEEEALLDQNCSLGSFCGSCPLPCTGSYLQDFNQLRTFLPNNSMLALYFSLQGGKFWFPAQFYRGPRVRDALFRYDSTSQTFTAR* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1395 166 ProSiteProfiles F-box domain profile. 7 53 IPR001810 GO:0005515
Lja1g1395 166 SUPERFAMILY F-box domain 9 66 IPR036047 GO:0005515
Lja1g1395 166 Gene3D - 2 88 - -
Lja1g1395 166 PANTHER ESTS AU081301(E20138) 9 166 - -
Lja1g1395 166 Pfam F-box domain 10 51 IPR001810 GO:0005515
Lja1g1395 166 PANTHER CYCLIN-LIKE F-BOX 9 166 - -
Lja1g1395 166 SMART fbox_2 13 53 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1395 Lja-Chr1 14874696 14875264 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1395 - - gmx:100797585 201.06