Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1394 ATGGAGAATGCTGAAAAACACGGTAACTCTATCTGTCTCTTGAATCTTCCTGAACTCATTCTTGATTGCATCCTCAAACGCCTCTCACCAATGGAGCTCATCAAAATGTCCGAGGTGTGCACTTGTTTAAGGGATGCATGTAGAAGCGATCATCTGTGGGAAAACCTCATCAACCAGAAATGGGGTAGAATCATTAATGGTGAGTCTACTTTCAAAGAGTGGCAATGGCACCTAACAAAATTGAATTCAATAGAAACCCTCTTTAACATCAATCTGGATTGGTCACTTGGGTCTTTGTGTGGTTCTTTGCATGAGCTATGCATTGGCTCATATCTAGAAGGTTGTGGGCATGTTCAGAGGTTCTTGTCAAATAATCCCATGATGGGTCTTTACTTGTCTCTAGACACTGGCAAGTTCTGGTTTCCAGCTCAAGTGTACTGCGATTGCGCTCTCGTTTCCAACGTCTTATTTAGCTATGACTCCAACACTGATACCTTTAAAGCAAGGGCACCAAGTTGGGGATGGAAGCCTGTTGATCATGTCGAGATCCAATACAAAGAAAGGCGTGAAGCTCATTATGATTGGTTATACGGTATTATTGATCACTTGGACTCATGTAATGAGAATGAGGGTTACTGTAGCTGTCGTGATTCAGGGACGCTGGTTGTAAGGCTCAGGGATTACCTTGATGGGCAACTTGCCGGAATTACGCAAGTCTATCTACCAAGAGATAATATTGGGAGAGAAGGAGACATGCGCACTGGATTCTATGGAGGAATCAGAAAGCTTAACAGTGAAGAAGAGATTCAAAAATGGATGGAGCAATTTAGCTAA 834 0.4269 MENAEKHGNSICLLNLPELILDCILKRLSPMELIKMSEVCTCLRDACRSDHLWENLINQKWGRIINGESTFKEWQWHLTKLNSIETLFNINLDWSLGSLCGSLHELCIGSYLEGCGHVQRFLSNNPMMGLYLSLDTGKFWFPAQVYCDCALVSNVLFSYDSNTDTFKARAPSWGWKPVDHVEIQYKERREAHYDWLYGIIDHLDSCNENEGYCSCRDSGTLVVRLRDYLDGQLAGITQVYLPRDNIGREGDMRTGFYGGIRKLNSEEEIQKWMEQFS* 278
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1394 277 PANTHER ESTS AU081301(E20138) 9 176 - -
Lja1g1394 277 SMART fbox_2 16 56 IPR001810 GO:0005515
Lja1g1394 277 PANTHER CYCLIN-LIKE F-BOX 9 176 - -
Lja1g1394 277 ProSiteProfiles F-box domain profile. 10 56 IPR001810 GO:0005515
Lja1g1394 277 PANTHER ESTS AU081301(E20138) 176 275 - -
Lja1g1394 277 PANTHER CYCLIN-LIKE F-BOX 176 275 - -
Lja1g1394 277 Gene3D - 1 89 - -
Lja1g1394 277 SUPERFAMILY F-box domain 8 77 IPR036047 GO:0005515
Lja1g1394 277 Pfam F-box domain 13 54 IPR001810 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja1g1394 Lja-Chr1 14869010 14872474 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1394 - - gmx:100797585 255.373