Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1392 ATGGGGAACACTGAAAAACGTGGTAACATGATCTCTCTCTTGAATTTGCCTGAACCCATTCTGGATTGCATCCTCAAACGCCTCTCACCAACCGAACTCATCAAAATGTCAGTGGTGTGCACTTGTTTAAAGGATGCATGTCGAAGTGATCATTTATGGCAAAACCTCTTCCAACAAAAATGGGGTACAATCATTGGTGATTTTGCTTTCAAGGAATGGCAATGGCACATTGCAAAATTCAAGTCAGAAGAAGAAAACCTCTTCAATCAAAACATAAATCAAAATGGGTCACTTGGGTCTTTGTCTTTCTGTGGTGGCGCTTGGCCTAAATTATGCCTTAACTCATATTTGGAAGATTGTAGCCATCTTCAGAGCTTCTTGTCAAATAAATTCATGATTGCTCTTTATTTGGAGACTGGCAAGTTCCGGTTTCCAGCTCAAGTATACAGGGGCACACTTGTTTCTGATTGCATATTTAGCTATGACTCCAAAAGTGATACCTTTGTAGCAAGGGAACGAGGCGGGGGATGGCTGATTATGGGGCGTAATATCGGCTGGGAAAAGCTGAGACGTTCCTCGGTTGAAACCCCTCCATGTGTTCGTTACGTCTCTGATTGTTTGGAAGACTTAAAGCCCGGTGATCATATTGAGATCCAATGCAAGCTAATGGTTGAAACTCATTATGGTATTGCAATGAATGGTTTGCAGATTGGTGGTATGCTGTTATTGGTCACTTGGACTCATCACTCATGTAATGAGAATGAGCACTGTAGCTGTGGTGATTCAGCTGATTATTTGATTTGA 804 0.4179 MGNTEKRGNMISLLNLPEPILDCILKRLSPTELIKMSVVCTCLKDACRSDHLWQNLFQQKWGTIIGDFAFKEWQWHIAKFKSEEENLFNQNINQNGSLGSLSFCGGAWPKLCLNSYLEDCSHLQSFLSNKFMIALYLETGKFRFPAQVYRGTLVSDCIFSYDSKSDTFVARERGGGWLIMGRNIGWEKLRRSSVETPPCVRYVSDCLEDLKPGDHIEIQCKLMVETHYGIAMNGLQIGGMLLLVTWTHHSCNENEHCSCGDSADYLI* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1392 267 SUPERFAMILY F-box domain 7 70 IPR036047 GO:0005515
Lja1g1392 267 Gene3D - 3 93 - -
Lja1g1392 267 Pfam F-box domain 13 54 IPR001810 GO:0005515
Lja1g1392 267 SMART fbox_2 16 56 IPR001810 GO:0005515
Lja1g1392 267 PANTHER ESTS AU081301(E20138) 10 263 - -
Lja1g1392 267 PANTHER CYCLIN-LIKE F-BOX 10 263 - -
Lja1g1392 267 ProSiteProfiles F-box domain profile. 10 56 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1392 Lja-Chr1 14823296 14824717 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1392 - - gmx:100797585 268.47