Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1388 ATGGCAATCCTTAAGATAAGCAAAAAGCACCACAAGCTTTTCAACAACCCATTCCCTTCTTCTGCTTCAACCAACATTCCTTGTGTCCAAGGTTCTCTGTTCATCAATTCCAAAACGTTACACACAGATCAAACCTTCTCAATTGGCAATGATTTTCAGCTTCTTTGGTCCTCCATCAATGGTGGGCACCTCTCAATTTCTCATCTTTCTCAGGCAACCAGATCCATTTGGTCTACAATCCCAGGGAAGGCTTTTATTTCAGCTGCACTTGTTGACACAGAGGTGGAAGAAAGCAGGGGATCCTTTCTGATCAAAGACAGAGATGTTCATCTGATCTGTAACCATCAAACCATTGAGGATATTAGGATTATCAATCAATTTGATCATGGTTTGGAACATGAAGTTGTTGCAGATTCTTCATATGGGAATGCAGGATCAGATTCAGACCAGAACACTGATGACGCAGAAGAAACCAAGCTTCCTGGTTTGTTGATCACAGGAAAGCTTTTCAACAAGACTAAGAAGAACAGAAGGCTTCAAAAGCATGGAATTCAAACAAATATGCAGTTTGAAGCAAAAGGACCCTCTGCTTATGCAAAGTATTGGGTTTTGTTCAATCAGAAAACCAAACATCAGGTGGGGTTTCAGGTGAAGATTGAGAAAGCTAACTACGTCGTCTCGCACAACCCGGTCTCTCCGGCAGCTTCAGGAATATACAAGGGCTTTAAGAAAAGGCTGAGTAATAGAAAAAAGAGGCTGGGTTGGTGGTGGTACTTTTCAAGGCCAAGAGGGTTTGTCCTGGTTTCTTCTGTGGAGGAAGAAATAGCAGACTTGGATATCCCAAAATCTAAAGAATTCAACAGAGTGTGGTTGACATATGCAAGTGATGAGAATGAGAGATTTTATGGTTTTGGGGAGCAGTTTTCTCACATGAACTTTAAGGGCAAAAGGGTACCCATTTTTGTTCAAGAACAAGGTATTGGAAGAGGAGATCAACCTATCACTTTTGCTGCTAACTTGGTCAGTTACAGGGCAGGGGGTGATTCAAGTACAACATATGCTCCTTCTCCATTCTACATGACATCAAAAATGAAATCTGTCTACCTTGAAGGATATGATTACACCATTTTCGATCTTACTAGACTTGACAGAGTACAGATACAGATACATGGAAACTCAGTTGAAGGGAGGATATTGCATGGGAACTCACCTTGTGAACTGATTGAACATTTCACTGAAACCATCGGAAGGCTACCTGAGCTTCCAGAGTGGATAGTATCTGGTGCTATAGTTGGAATGCAGGGTGGCACGGATGCGGTGCGTCATATTTGGGATGAACTAAAGACTCATGACGTTCCTGTCTCAGCATTTTGGTTGCAGGATTGGGTAGGGCAGAGAGAAACAATGATTGGTTCACAACTCTGGTGGAACTGGGAAGTGGATGCACAAAGATATTGGGGGTGGAATGAACTTATCAAAGAACTTAGCACTCAGCATATTCAAGTTATGACTTATTGCAATCCCTGTCTAGCTCCGGTTGATGAGAAGCAAAACAAAAGGAGAAACCTGTTTGAGGAGGCAAAACAGTTGGACATATTGGTGAAAGACTGTACTGGGAATCCATACATGGTTCCAAATACGGCTTTTGACGTTGGAATGCTAGATTTAACGCACCCAAAGACTGGAACTTGGTTCAAGCAGATTCTAGGAGAAATGGCGGATGATGGAGTTAGAGGGTGGATGGCTGATTTTGGTGAAGGCCTTCCTGTTGACGCTATTTTATATTCAGGTGAAGATCCTATTTCAGCTCATAACAGATACCCAGAACTATGGGCCCAAATTAACAGAGAACTTGTGGAAGAATGGAATAGTAAGAACAAGGTGAAGGAAGACCAAGAAGAGGGCTTGGTTTTCTTCATGAGGGCTGGTTTTAGAGATAGCCCCAAGTGGGCAATGCTATTCTGGGAAGGAGACCAAATGGTAAGTTGGCAAACAAATGATGGAATAAAGAGTTCTGTAGTTGGCCTACTCAGCAGTGGAATTTCTGGCTATTCCTTTAACCACAGTGACATTGGAGGATATTGTACAGTAAACTTACCTCTAGTTAAATACAGAAGAAGTCAAGAATTACTTATGCGATGGAGTGAGCTAAATTCTTTCACCACAGTCTTCCGCACCCATGAAGGAAACAAGCCTTCATGCAACAGCCAGTTTTACTCAAACCAAGAAACTCTGTCACACTTTGCGCGCTCTGCAAAAATATACACAGCATGGAAATTTTACCGAATTCAACTTGTGAAGGAAGCGGCGCAGAAAGGACTACCAGTATGCCGCCACCTATTTCTCCACTACCCTAACGATGAACGCGTGCATCACTTGAGTTATGAGCAGTTCTTAGTTGGTTCTGAGTTCCTAGTGGTGCCTGTCCTTGACCAAGGAAAGAAGAAAGTAAAAGCTTATTTTCCAATGGGAGAGAGTAGCGGTTGGCTACATATCTGGACAGGAAAAGTATTTTCCAAACAAGGAAGTGAAGCATGGGTAGAAGCTCCAATAGGAAACCCTGCTGTATTTGTTAAGGTTGGCTCCCATGTTGGAGAAACCTTTGTGAATAACCTAAGAAGTTTAGGCATTCTTTAA 2637 0.4236 MAILKISKKHHKLFNNPFPSSASTNIPCVQGSLFINSKTLHTDQTFSIGNDFQLLWSSINGGHLSISHLSQATRSIWSTIPGKAFISAALVDTEVEESRGSFLIKDRDVHLICNHQTIEDIRIINQFDHGLEHEVVADSSYGNAGSDSDQNTDDAEETKLPGLLITGKLFNKTKKNRRLQKHGIQTNMQFEAKGPSAYAKYWVLFNQKTKHQVGFQVKIEKANYVVSHNPVSPAASGIYKGFKKRLSNRKKRLGWWWYFSRPRGFVLVSSVEEEIADLDIPKSKEFNRVWLTYASDENERFYGFGEQFSHMNFKGKRVPIFVQEQGIGRGDQPITFAANLVSYRAGGDSSTTYAPSPFYMTSKMKSVYLEGYDYTIFDLTRLDRVQIQIHGNSVEGRILHGNSPCELIEHFTETIGRLPELPEWIVSGAIVGMQGGTDAVRHIWDELKTHDVPVSAFWLQDWVGQRETMIGSQLWWNWEVDAQRYWGWNELIKELSTQHIQVMTYCNPCLAPVDEKQNKRRNLFEEAKQLDILVKDCTGNPYMVPNTAFDVGMLDLTHPKTGTWFKQILGEMADDGVRGWMADFGEGLPVDAILYSGEDPISAHNRYPELWAQINRELVEEWNSKNKVKEDQEEGLVFFMRAGFRDSPKWAMLFWEGDQMVSWQTNDGIKSSVVGLLSSGISGYSFNHSDIGGYCTVNLPLVKYRRSQELLMRWSELNSFTTVFRTHEGNKPSCNSQFYSNQETLSHFARSAKIYTAWKFYRIQLVKEAAQKGLPVCRHLFLHYPNDERVHHLSYEQFLVGSEFLVVPVLDQGKKKVKAYFPMGESSGWLHIWTGKVFSKQGSEAWVEAPIGNPAVFVKVGSHVGETFVNNLRSLGIL* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1388 878 CDD GH31_glucosidase_YihQ 416 752 IPR044112 -
Lja1g1388 878 Gene3D glycosyl hydrolase (family 31) 180 400 - -
Lja1g1388 878 PANTHER SULFOQUINOVOSIDASE 29 876 - -
Lja1g1388 878 SUPERFAMILY (Trans)glycosidases 407 773 IPR017853 -
Lja1g1388 878 Gene3D Glycosidases 403 806 - -
Lja1g1388 878 Pfam Glycosyl hydrolases family 31 399 862 IPR000322 GO:0004553|GO:0005975
Lja1g1388 878 SUPERFAMILY Glycosyl hydrolase domain 775 859 - -
Lja1g1388 878 CDD GH31_N 286 416 - -
Lja1g1388 878 Coils Coil 513 533 - -
Lja1g1388 878 Gene3D - 807 859 IPR013780 -
Lja1g1388 878 SUPERFAMILY Galactose mutarotase-like 254 404 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1388 297 850 Glycoside Hydrolase AT3G45940 23.729 3.04e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1388 - - gmx:100779005 1534.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1388 1 14792808 14797765 Lja1g1388 1 14792808 14797765 ECH