Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1386 ATGTCGTCTAGCAGCAGCCACATTGGTAACGCCGGCGGTGAACACGACGGCAAAACCTTCTTCAAAGGCCGCCCCAAAAAGCCTCCTGCCGTCGTCGACGACGACTTCCTCACCCTCTTGCACGGTTCTGATCCCGTCCGTGTCGAGCTCACTCGCCTCGAAAATGAACTCCGAGAGAAAGACAGAGAGTTTGGGGATGCTGTTGCGGAAATCAAGTCCTTGAGGAACTCAGAGCGTCTTAAACAGAAGGCGGTTGAAGAGCTAACAGATGAGCTGAACAAGGTAGATGAGAAGCTAAAAGTAACCGAAGCTCTTCTCGAAAGTAAGAACCTTGAAATAAAAAAAATTAATGATGAGAAAAAGGAAGCATTGGCTGCACAATTTGCTGCAGAAGCTACACTTAGAAGGGTCCATGCTGCTCAGAAAGACGATGAAATGCCTCCAATTGAAGCTATTATCGCCCCCCTGGAGGCAGAGCTTAAGCTTGCTAGGATGGAGGTGGAAAAGTTGCAAGATGACAATAGCGCACTGGATCGGCTAACCAAATCAAAGGAGGCTGCACTTCTTGAGGCTGAGAGAACTGTTCAAATCGCTTTGGCGAAAGCATCCCTGGTTGATGATCTGCAAAACAAAAATCAAGAATTAATGAAACAGATTGAAATATGCCAGGAGGAGAACAAAATCGTGGACAAAATGCATCGCCTAAAGGTTACTGAAGTTGAAAAGCTAACCCAAACTGTTCGTGAACTTGAAGAGGCTGTCTTGGCAGGTGGTGCTGCTGCTAATGCTGTCCGTGATTACCAGCGCCAAGTGCAAGAGATGAATGAGGAAAGGAAAGTTTTGGAGCGGGAAGTAGCTCGTGCTAAAGTTACTGCAAACAGGGTTGCCACTGTAGTTGCGAATGAGTGGAAAGATGCTAACGACAAAGTGATGCCTGTAAAGCATTGGCTAGAAGAAAGAAAAGTTTTCCAGGGTGAAATGCAACAACTACGAGATAAATTGACTGTAGCTGAGCGCACTGCAAAAGCAGAAGCACAAATGAAGGAAAAATATCAATTGCGATTCAAAGTTTTGGAAGAAAGGATTAAGGCATCTAATGGTAATTCCAAAATCACTGCACCAGATGGAAGGAACATTTCTAGACCTTCACGTCGTCAATCTTTTGGTGGAGCTGATAGTCTTTCGACATTCTCCTCCAATGGATGTCTATCAAGGAAAAACTTGAGTTTAAAATCAGGGTCTCTAAGATCAAACAGTGGTAATATGTTACTAAAGAATGGAAAATTTTCAGAAGCAAATGGGCTAGGTCATGGCATGCCAACCAACACGAATGATCATACCATCACTAGTGAAACAAATACTACACATGAAGAGAGTGAAAATAGTACTCTAATTGAAAAATCTAAACCAGAACATGAAGACTTTGTTTCAGGAATGCTTTATGACATGTTGCAAAAAGAGGTTATATCTCTGAGGAAAGCTTGTCATGACAAGGATCAGAATCTTAAAAACAAGGAGGATTCAATAGAGATGTTGGCGAAGAAGGTTGACACATTGAATAAAACTATGGAAGTTGAAGCCAAAAGAATGCGTAGGGAAGTAGCTTCCATGGAAAAGGAGGTTGCTGCTCTGCGGGTTAGTAAGGATGACCATAGGATACGGCGAACCAGTGCTCCTAGGGCGGCTGTAAATTCCCAGTCAATTTCTGCCAGGAGTGCACGTAACTTTTAG 1731 0.4362 MSSSSSHIGNAGGEHDGKTFFKGRPKKPPAVVDDDFLTLLHGSDPVRVELTRLENELREKDREFGDAVAEIKSLRNSERLKQKAVEELTDELNKVDEKLKVTEALLESKNLEIKKINDEKKEALAAQFAAEATLRRVHAAQKDDEMPPIEAIIAPLEAELKLARMEVEKLQDDNSALDRLTKSKEAALLEAERTVQIALAKASLVDDLQNKNQELMKQIEICQEENKIVDKMHRLKVTEVEKLTQTVRELEEAVLAGGAAANAVRDYQRQVQEMNEERKVLEREVARAKVTANRVATVVANEWKDANDKVMPVKHWLEERKVFQGEMQQLRDKLTVAERTAKAEAQMKEKYQLRFKVLEERIKASNGNSKITAPDGRNISRPSRRQSFGGADSLSTFSSNGCLSRKNLSLKSGSLRSNSGNMLLKNGKFSEANGLGHGMPTNTNDHTITSETNTTHEESENSTLIEKSKPEHEDFVSGMLYDMLQKEVISLRKACHDKDQNLKNKEDSIEMLAKKVDTLNKTMEVEAKRMRREVASMEKEVAALRVSKDDHRIRRTSAPRAAVNSQSISARSARNF* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1386 576 Coils Coil 153 180 - -
Lja1g1386 576 MobiDBLite consensus disorder prediction 366 392 - -
Lja1g1386 576 Pfam Microtubule-associated protein 70 34 567 IPR009768 GO:0007010|GO:0008017
Lja1g1386 576 MobiDBLite consensus disorder prediction 436 459 - -
Lja1g1386 576 MobiDBLite consensus disorder prediction 557 576 - -
Lja1g1386 576 Coils Coil 502 547 - -
Lja1g1386 576 Coils Coil 50 126 - -
Lja1g1386 576 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-1-LIKE 34 571 - -
Lja1g1386 576 MobiDBLite consensus disorder prediction 559 576 - -
Lja1g1386 576 MobiDBLite consensus disorder prediction 1 26 - -
Lja1g1386 576 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 34 571 IPR009768 GO:0007010|GO:0008017
Lja1g1386 576 Coils Coil 205 225 - -
Lja1g1386 576 Coils Coil 264 291 - -
Lja1g1386 576 MobiDBLite consensus disorder prediction 414 471 - -
Lja1g1386 576 Coils Coil 313 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1386 Lja-Chr1 14747929 14753284 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1386 - - gmx:100814485 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1386 1 14747929 14753284 Lja1g1386 1 14747929 14753284 ECH