Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1384 ATGAGCAGCAACTCAGTGATGATGATGAGCAGCGTGCAACAAAGGACACCCACAAAAAGAACCAAACCCAAAGAGAAGCACACCAAACCCATCAAGGTAGTGTACATATCAAACCCCATGAAGATCAAGACCAGTGCTTCAGAGTTCATGGCCCTGGTGCAAGAACTCACCGGCCAGGACGCTGAATCGCCACCTGACCCTTCAAGATTCAACTACGACGACCCTAATCAGATGGTGGAGAAGATCATTGACCATGATGAAAATGATCTTGTTGACCTCGTGGTGCCAGCTCCACCGTTGGATCCTACTTATCAAGGGCACAACTCTAACTCGTTTGAGAGTTTTGAGCCGTTTGATGATGTTGATGATGGTGTTTTCACTCCTCAGATGCTGGAGAATATTTCAGCTCTGCTTCCCCCAACTGTTTTCTACGACCCTCATGAGTGGTGA 450 0.4756 MSSNSVMMMSSVQQRTPTKRTKPKEKHTKPIKVVYISNPMKIKTSASEFMALVQELTGQDAESPPDPSRFNYDDPNQMVEKIIDHDENDLVDLVVPAPPLDPTYQGHNSNSFESFEPFDDVDDGVFTPQMLENISALLPPTVFYDPHEW* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1384 149 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 9 145 IPR039335 GO:0051091
Lja1g1384 149 MobiDBLite consensus disorder prediction 1 17 - -
Lja1g1384 149 MobiDBLite consensus disorder prediction 1 31 - -
Lja1g1384 149 Pfam VQ motif 36 61 IPR008889 -
Lja1g1384 149 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 9 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1384 Lja-Chr1 14716157 14716911 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1384 - - gmx:102661022 137.117