Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1380 ATGATTGGGAAAGATAGCGGGGTTATGAAGGCATGGGAAGCCACCATGAGAAAGACACATGCAGTTGCTAAGAAACGTGCCAATAGTTTATTCGGGACATTAACTTTGGCAAACACAGGCGAAGAAGAAACCAACAAGGATGATGATGATGATGATGAAGATGAAGATGATGGAAGCGGGGTATTTGAACTTTACAATGAAGAGAAGTTTCTCCCCAATGGGGATTACTATACAGGGCAATGGGCAAATAACTTCCCTCATGGACAAGGGAAATATCTCTGGACTGATGGGTGCATGTATGTTGGAGAATGGTTCAGAGGCAAAACAATGGGAAAGGGTAGGTTCAGTTGGCCTTCAGGGGCTACCTATGAAGGTGAATTTAACAGTGGTCATATGGATGGGACTGGAACATACACAGGGCTCAATGGGCAAACTTATAAGGGGCAATGGGTGATGAATTTGAAACATGGTCATGGGTTGAAGAGTTATGCCAATGGGGATTGGTATGAAGGAGAGTGGAAGCTAGGGTTGCAGGATGGGGAAGGGAGATATGTGTGGAAAGATGAGAGTTACTATGTAGGGGAGTGGAGGAATGGGACAATTTGGGGAAAAGGGTTATTTGTTTGGGCTGATGGGAAAAGCTTTGATGGGTGTTGGGATGAGGGTGTGCCAAAGGGGAATGGAACTTTCAAATGGCCTGATGGAAGTTACTATGAGGGGAATTGGAATAAAGACAACAAAGATCATAATGGGACATTCTATCCATCTGAGTCATCTGAGGAGTGCCATTTTGATTGGGATCCACAGGAGTTGTATGAAGTGTTGAAAGGATACATGGTGTGTCGTCCCGGGGATAAGGTTCTGGTTTTTCCGTCTCAGAAGAGGCTTGCGGTGTGGAGGTCTGCAAAGAGAGGGGATAGTGGTAAGAATAGGAGAATGTCAGTAGATGGGAGGGTGAGTGTGGGAGTGGAGAGGCCAAGAGAGAGAATGCATTTGTGGGATGGTGATGTTAGTGGTGTTAACAGGACTACAAGTAGGATGAGTGATCCGGGTGAAGATTCGATGAGTTTGCGTACTCCAAACTCTGAAAGTGTGGCTCAACTCCAACCTCTGAAAGCGCCAAGGAAATCAAAGAGGCAGGGAGAGACCATATGCAAAGGGCATAAGAATTATGAGCTCATGCTCAATTTGCAGCTTGGAATCAGACATTCTGTTGCAAGACCTGCTCCAACAGCATCACTTGATCTTAAACCTTCAGCTTTTGATCCTAAGGAGAAAGTGTGGACAAGATTTCCACCTGAAGGATCCAAATATACTCCACCACATCCCTCTTGTGACTTTAAGTGGAAGGACTATTGCCCGGTAGTGTTTAGGACTCTTAGGAAACTATTCAATGTGGATCCAGCGGATTACATGTTATCCATATGTGGAAATGATGCCCTTCGCGAACTTTCCTCTCCGGGAAAAAGTGGCAGCTTCTTTTACTTGACCAGTGATGACCGTTACATGATTAAGACAATGAAGAAAGCTGAAGTGAAAGTTCTCTTGAGAATGCTTTCAGCCTATTACAATCATTTTCGAGAGCATCAAAATACTCTAGTGACAAAGTATTATGGCCTACATTGTGTGAAGTTAAATGGACCAATTCAGAAGAAGGTTCGATTTATCATAATGGGCAACCTCTTCTGTTCTGAGTATGTCACCCATAGACGTTATGATTTGAAAGGTTCTTCACTTGGCCGCATAACAGACAAGCCTGAGACCGAGATTAGTGAAACCACCATCCTTAAAGATCTTGATCTTAATTTTATATTTCGACTAGAGAGCTCATGGTTTCAAGAGTTTTGCAGACAAATTGATAGGGACTGTGAGCTTCTGGAACAGGAGGGAATTATGGACTATAGTTTGCTGGTGGGTATTCATTTCAAACATATATCAACAGAAGGGGAAATTATTCCTATAGGATCTCAAACTCCTACTGGTGATTCAGAGAATGAAGGCACTCCCCATACTGCAGAAGACGAAACAGATGAACTTCCTTCTGATCCTTCCAGTGTAATAATGGGTATGAACATGCCAGCAAGGATTGAAAGGACAGTGAGAAAAAGTGATTTTGAAGCACAACTTGTAGGAGAACCTATTGGAGAGTTCTATGAAGTTTTTTTGACTTTTGGTATCATAGATATACTTCAAGACTATGATATCAGCAAGAAGCTTGAGCATGCCTATAAGTCCTTTCAATATGATCCCACTTCAATCTCAGCCGTGGATCCAATACAGTACTCAAGGCGCTTCCGTGATTTCATATTTAGAATATTTACTGAAGACTCATGA 2334 0.4284 MIGKDSGVMKAWEATMRKTHAVAKKRANSLFGTLTLANTGEEETNKDDDDDDEDEDDGSGVFELYNEEKFLPNGDYYTGQWANNFPHGQGKYLWTDGCMYVGEWFRGKTMGKGRFSWPSGATYEGEFNSGHMDGTGTYTGLNGQTYKGQWVMNLKHGHGLKSYANGDWYEGEWKLGLQDGEGRYVWKDESYYVGEWRNGTIWGKGLFVWADGKSFDGCWDEGVPKGNGTFKWPDGSYYEGNWNKDNKDHNGTFYPSESSEECHFDWDPQELYEVLKGYMVCRPGDKVLVFPSQKRLAVWRSAKRGDSGKNRRMSVDGRVSVGVERPRERMHLWDGDVSGVNRTTSRMSDPGEDSMSLRTPNSESVAQLQPLKAPRKSKRQGETICKGHKNYELMLNLQLGIRHSVARPAPTASLDLKPSAFDPKEKVWTRFPPEGSKYTPPHPSCDFKWKDYCPVVFRTLRKLFNVDPADYMLSICGNDALRELSSPGKSGSFFYLTSDDRYMIKTMKKAEVKVLLRMLSAYYNHFREHQNTLVTKYYGLHCVKLNGPIQKKVRFIIMGNLFCSEYVTHRRYDLKGSSLGRITDKPETEISETTILKDLDLNFIFRLESSWFQEFCRQIDRDCELLEQEGIMDYSLLVGIHFKHISTEGEIIPIGSQTPTGDSENEGTPHTAEDETDELPSDPSSVIMGMNMPARIERTVRKSDFEAQLVGEPIGEFYEVFLTFGIIDILQDYDISKKLEHAYKSFQYDPTSISAVDPIQYSRRFRDFIFRIFTEDS* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1380 777 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 387 773 IPR002498 GO:0016307|GO:0046488
Lja1g1380 777 CDD PIPKc_AtPIP5K_like 390 772 - -
Lja1g1380 777 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 376 560 IPR027484 -
Lja1g1380 777 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 17 776 - -
Lja1g1380 777 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 71 199 - -
Lja1g1380 777 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 17 776 IPR023610 -
Lja1g1380 777 SUPERFAMILY SAICAR synthase-like 386 773 - -
Lja1g1380 777 MobiDBLite consensus disorder prediction 43 59 - -
Lja1g1380 777 Gene3D - 561 773 - -
Lja1g1380 777 MobiDBLite consensus disorder prediction 337 382 - -
Lja1g1380 777 Gene3D - 53 106 - -
Lja1g1380 777 Gene3D - 107 151 - -
Lja1g1380 777 Gene3D - 152 202 - -
Lja1g1380 777 SMART PIPK_2 417 774 IPR002498 GO:0016307|GO:0046488
Lja1g1380 777 PIRSF PIP5K_plant 12 777 IPR017163 GO:0005524|GO:0016308
Lja1g1380 777 MobiDBLite consensus disorder prediction 653 686 - -
Lja1g1380 777 MobiDBLite consensus disorder prediction 338 368 - -
Lja1g1380 777 Pfam MORN repeat 215 236 IPR003409 -
Lja1g1380 777 Pfam MORN repeat 123 144 IPR003409 -
Lja1g1380 777 Pfam MORN repeat 192 212 IPR003409 -
Lja1g1380 777 Pfam MORN repeat 146 167 IPR003409 -
Lja1g1380 777 Pfam MORN repeat 169 188 IPR003409 -
Lja1g1380 777 Pfam MORN repeat 77 99 IPR003409 -
Lja1g1380 777 Pfam MORN repeat 100 121 IPR003409 -
Lja1g1380 777 SMART morn 236 257 IPR003409 -
Lja1g1380 777 SMART morn 167 188 IPR003409 -
Lja1g1380 777 SMART morn 75 96 IPR003409 -
Lja1g1380 777 SMART morn 190 211 IPR003409 -
Lja1g1380 777 SMART morn 144 165 IPR003409 -
Lja1g1380 777 SMART morn 213 234 IPR003409 -
Lja1g1380 777 SMART morn 121 142 IPR003409 -
Lja1g1380 777 SMART morn 98 119 IPR003409 -
Lja1g1380 777 MobiDBLite consensus disorder prediction 33 59 - -
Lja1g1380 777 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 476 771 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1380 Lja-Chr1 14694593 14699006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1380 1 777 Acyl Lipid Metabolism Gene Families AT3G56960 65.146 0.0 1068
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1380 K00889 - gmx:100808754 1315.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1380 1 14694593 14699006 Lja1g1380 1 14694593 14699006 ECH