Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1375 ATGGGTGATTCATCGGAGGATTTCTCGGTGGTGGTTCTGGCTTCCGATCTCGCCGTCGATGCTCGACCCTTCCTCGCCCACCAATACCAACAAGGAGCAGAACCAGAACCAGAAGAAGAGAGTTGGCACGATTGTTCTCAGCACCTCTCCCCCGACGAAGACTTCTCCGATCTCGATCAACTGCAATTCCTCACCCTTCATGGCTCCGACAAGAATAACCACCGCATCCTCCGTATCGTCGGCAAGTACTATCCTGCAACAGTTGTGAGTGCAGAGCGGTTGAAGAGGTATGTTTTTCATAGAATTTGTAGTGAATTGCCAGATGGACCATTCTGCATCGTTTACATGCACAGCACCGTTCAAACAGAAGATAATTCCCCTGGCCTGACCATCTTGAGGTGGATTTATGAAGAACTTCCAGCTGATTTTAAAGACAGGCTTCAAACTGTGTACTTCATCCACCCTGGGCTTCGCTCCAGGCTAGTCATCGCTACTCTTGGCCGGTTTTTTCTGAGTGGAGGATTATATTGGAAGATTAAGTATGTAAGCCGCCTTCAGTATCTTTGGGATGACATAAAGAAAGGGGAGATTGAGATTCCAGATTTTGTGCGAAAGCATGATGATATTTTGGAGCATAGACCGCTCACAGATTATGGCATTGAACCCGATCCCTTTCACTTGACTGGGATGCCTTCACTCACACCCTCATTTGGAAAATACGAGGATAGATGGGGAGCAAGGGATTATGCGTCAGAGCACGGTTACCACTGA 771 0.4786 MGDSSEDFSVVVLASDLAVDARPFLAHQYQQGAEPEPEEESWHDCSQHLSPDEDFSDLDQLQFLTLHGSDKNNHRILRIVGKYYPATVVSAERLKRYVFHRICSELPDGPFCIVYMHSTVQTEDNSPGLTILRWIYEELPADFKDRLQTVYFIHPGLRSRLVIATLGRFFLSGGLYWKIKYVSRLQYLWDDIKKGEIEIPDFVRKHDDILEHRPLTDYGIEPDPFHLTGMPSLTPSFGKYEDRWGARDYASEHGYH* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1375 256 CDD SEC14 52 200 IPR001251 -
Lja1g1375 256 SUPERFAMILY CRAL/TRIO domain 55 196 IPR036865 -
Lja1g1375 256 Pfam Divergent CRAL/TRIO domain 74 207 IPR001251 -
Lja1g1375 256 Gene3D - 52 198 IPR036865 -
Lja1g1375 256 SMART sec14_4 57 208 IPR001251 -
Lja1g1375 256 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 3 249 - -
Lja1g1375 256 PANTHER OS01G0948300 PROTEIN 3 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1375 Lja-Chr1 14580618 14584527 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1375 - - lja:Lj1g3v4156080.1 536.954