Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1363 ATGGGTTGCTCAGCTTCCAAAACCACCACCATTGTTGCCAACAGAAATCCAGAAAATCCCTCTCCTTCTGCTTCTCTTGCATCTTCTTCTTCTTCCTCATCTTTTTCTGCATCATCATCATCCTCTTCTTCTAAATCACAATGCTCCAATTCTTCACCAAAACCTCCAAGAGCTCTGTCTCTCCCAATGCCTCTAGTCCACCACCCTCCCACCAAAAAGGGTGACACCCATCACCTTGTTTCCCTCACCTCCACTACCTATGGTTCTCTTCTTATGATTGACCAAAAAGTTCCCAAATTTAGCCACAAGGACCCTCATCTTGAACCTCTTCTCACCAAAAGCTTCCAAAAGGGGTCAAACCCAAAAGAGTCAGAGCATGCTCTGTCTCCAGACTCTGTTATCAACACATGGGAACTCATGGATGGTTTGGATGAAGATTCACATGAAACCAGTGCAAAGCTTCAACCTTTTATCATCTCAGAGAAACCCAGTTCATGCAGGTACACAATGTTTGATGGGTCTGCAAAAAGGAGGCTCCTTGATACCTTTGAATCACTGAAAGCTTCAGAAACATCCATGGAAAAAGAAAAACCATCTTCCCCTACCAAGAAGCCTCTTTGGCAGCATTTATCAGAGGAAGCTTTGCTTGCTAAGCTGGATCCAAGTGTGGCATGGAGTTACCGGAGAGCATTGTCATCTAGGCAACTTGGTAGGAACAACCTAAGCAGAGGTGTGAGGTCAATGGGGTCTAGTCCTTTGAGAACTTCCACTGCATTTGTTGAAAAGTTGTTCCTTTTACCTGGTTCTGAAGACAGGGTAGTGGTTTACTGCACTAGTTTGAGAGGGATTAGGAAGACCTATGAAGATTGCTGTTCAGTGAGGATGATTTTGAGAGGGTTCAGAGTTGCTGTTGATGAGAGGGACATTTCAATGGACTCATCTTACAGGAAGGAGTTGGAGAATGTGCTTGGTGGGAAAGCAGTGACTTTGCCTCAGGTGTTTATCAGAGGGAAACATGTTGGAAATGCAGAGGAGTTGAAGCAGATGAATGAGTCTGGGGAATTGGCAAAGCTTTTGGAAGGTTTTCCCACTCAGGATCCTGGGTTTGTGTGTGAGAATTGTGGAGATGTCAGGTTTATGCCATGTCCTAATTGCAATGGGAGCAAGAAGGTGTTTGAGGAGGAAGATGGAGTGTTGAGAAGGTGCCCTGATTGTAATGAGAATGGCTTGATTAGATGCCCCAATTGCTGCTCATGA 1257 0.4487 MGCSASKTTTIVANRNPENPSPSASLASSSSSSSFSASSSSSSSKSQCSNSSPKPPRALSLPMPLVHHPPTKKGDTHHLVSLTSTTYGSLLMIDQKVPKFSHKDPHLEPLLTKSFQKGSNPKESEHALSPDSVINTWELMDGLDEDSHETSAKLQPFIISEKPSSCRYTMFDGSAKRRLLDTFESLKASETSMEKEKPSSPTKKPLWQHLSEEALLAKLDPSVAWSYRRALSSRQLGRNNLSRGVRSMGSSPLRTSTAFVEKLFLLPGSEDRVVVYCTSLRGIRKTYEDCCSVRMILRGFRVAVDERDISMDSSYRKELENVLGGKAVTLPQVFIRGKHVGNAEELKQMNESGELAKLLEGFPTQDPGFVCENCGDVRFMPCPNCNGSKKVFEEEDGVLRRCPDCNENGLIRCPNCCS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1363 418 MobiDBLite consensus disorder prediction 1 56 - -
Lja1g1363 418 ProSiteProfiles Glutaredoxin domain profile. 261 366 - -
Lja1g1363 418 PANTHER GLUTAREDOXIN FAMILY PROTEIN 41 417 - -
Lja1g1363 418 MobiDBLite consensus disorder prediction 1 78 - -
Lja1g1363 418 Gene3D Glutaredoxin 271 363 - -
Lja1g1363 418 CDD GRX_GRX_like 272 413 - -
Lja1g1363 418 Pfam Glutaredoxin 273 340 IPR002109 -
Lja1g1363 418 SUPERFAMILY Thioredoxin-like 269 360 IPR036249 -
Lja1g1363 418 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 41 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1363 Lja-Chr1 14470807 14472444 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1363 K17479 - gmx:100811817 565.459