Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1361 ATGCCAAGCGGACCAGGCGAACCGGGCGGACCGGTGAGACAGGTTTCCTGTCAAGATATTCAGCTGGTGCAAAATCTCATAGAACGATGTTTACAACTGTATATGAGTCGGCAAGAAGTTGTGGACAAATTAGTATGCCAAGCAAAAATAGAGCCCAGTTTCACTGAACTAGTTTGGCAAAAGCTTGAGGAAGAAAATGAAGAATTCTTCCGAGCTTATTATACAAGATTGATGTTAAAGCAGCAAATAGTGGAATTCAACAGATTGCTGGATCAACAGTTGCATTTAATGCACTCAAACTCACTATCTGCCTCTAATGGGTCACATAACCCTGCAGTTGCATCACTACCTGCCTCTAATGGATCACATATCTCTGCGGTTTCATCACTGTCCAACTCTAATGGGTCACATATCCCCACAAGACATGAGAACCCCACATGCTACTCTGCTGAGCGACCCCAACCAGATTTGATGTCAGAAAATATGCAGCATAGTGTTAATTCCAGATTATCTAATACGTTTAATAATGGCGGGCCATCACTCCATACTCGTATGCATACTGTGGTTGATATGTCTTCTCATGGCATTGGGATTAATGGCTCTCCAAGCATGCTTTCTGCTCAGAACTCAAACTTGGGTATGATGCAAGGAATCAATGGGGGCATGATCAAATTAGAACCTGGATATTCAGATTGTTCCTACATGTTTAGTACTGGGGGAAATGTCCCGACTCGCCCAAACACCGCTGATGCTTCAGTTACATCATTCACTAATGTTGCGCCCAACGCACATGCTGTGAATGATGCAGTTCTGGAAACAGACTCTTCATTTGGATTTTTGGGACAGATTCCTAGAAATTTTAGCCTTTCAGATCTAACTGCTGATTTTTCTTTGAGTTCTGATATACTGGACAGCTATTCTAGGTCACCATTTCTACCCACTGATAATAACTTCCTTGAGAAAGTAGAGCAAGATAACAATAGGCTGGACTCCATATCAGAAGGCCTAAGTCATGAAGACTTTGGGAGTGAATAG 1035 0.4251 MPSGPGEPGGPVRQVSCQDIQLVQNLIERCLQLYMSRQEVVDKLVCQAKIEPSFTELVWQKLEEENEEFFRAYYTRLMLKQQIVEFNRLLDQQLHLMHSNSLSASNGSHNPAVASLPASNGSHISAVSSLSNSNGSHIPTRHENPTCYSAERPQPDLMSENMQHSVNSRLSNTFNNGGPSLHTRMHTVVDMSSHGIGINGSPSMLSAQNSNLGMMQGINGGMIKLEPGYSDCSYMFSTGGNVPTRPNTADASVTSFTNVAPNAHAVNDAVLETDSSFGFLGQIPRNFSLSDLTADFSLSSDILDSYSRSPFLPTDNNFLEKVEQDNNRLDSISEGLSHEDFGSE* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1361 344 Pfam Plant protein 1589 of unknown function (A_thal_3526) 23 75 IPR006476 -
Lja1g1361 344 PANTHER OS02G0137100 PROTEIN 12 337 IPR006476 -
Lja1g1361 344 MobiDBLite consensus disorder prediction 127 146 - -
Lja1g1361 344 PANTHER OS02G0137100 PROTEIN 12 337 - -
Lja1g1361 344 MobiDBLite consensus disorder prediction 127 143 - -
Lja1g1361 344 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 20 76 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1361 Lja-Chr1 14429164 14435077 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1361 - - lja:Lj1g3v4171210.1 457.218