Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1358 ATGGTGATGTATCTTGGCAGCGTAGGCAAGGGGGAGGAGGAGGATTTGGGATCTCAGCACGATGGGGGCGAGGGAGACAAGGCGGCAACAAAGGGTTGGATGAGGATAAATGTATGTGTTGCCGTTGGAAATGTGATCACCACCATTGTTGTGTTTCTTCTTGTAGGTAACAAGTCGATGACATCGTCGATGGCAACTCTAGCAACCATGGAGGAGATTATTTTTGGTAAAAGAAGATTCCTACATCGGTGCAACCATGGAGCTAGCTCGTGCCTCTCTCTTTTGCTTGGAATTAGTGTTTTTGAGGTACGAAACAAGACAAATTTTGGTACAAGTAGTCGTTTGAGAATTCTCACCACTCTTCCCTTTCACCGTCTTCCATACACGATGAGGTCACACTCACAGCTGCACCTCACCGCTTTCGTGACGGTTCTTGTGACTGCTTGGTTTGCATGCAACCGCAGCTTTGAATCATCCGATAATGACTCAGCAGCATTCTTCGGGGCTACCGAGGTTTGGCAATACGAAGCTGTTCCGATTGAAAGCGGCGCCGTCGGACCAGAGAGCTTCGCCTTCGGTCCCGGCGGTGAAGGCCCTTACACCGGCGTTTCTGACGGCCAAATCATCAAGTGGCACCATCCCCAGAAACGGTGGCTTAGCTTCGCTGTCACTTCTTCAAACAGAGATGACAAGTGTGGGGGACCATATGAAGAGCATCCCAAGAGAGAACACATCTGTGGCCGTCCACTTGGACTGTGCTTCAACATGCAATCTGGCGAGCTTTACGTTGCTGATGCTTACATGGGCCTTGTTGTTGTTGAGCCCAATGGGGGCACTGCTACAAAAATTACATCACATGTAGATGGTGAGCCCTTGGCATTCACAAACAGTTTGGATATTGATCAACGAACTGGAGTTGTTTACTTCACCAGCAGCAGTTCAAAATATGAAAGGAGGAACTACGTGTCTCTGATCCTAAGCGGAGAGAAAACAGGGAAGTTAATGAAATATGAACCACAAAGCCAACAAGTTAGTGTTCTTCTAAGCAATCTCACATTTGCAAATGGGGTAGCACTCAGCAAAGATGGTGACTACATTCTAATAGTAGAAACCACCAACTGCAGAGTACTTAAGTATTGGCTTGAAACACCAAAAGCAGGAACATTAGAAGTCTTTGCTGATCTACCAGGTTTCCCAGACAACATAAAAAGAAGTCTAAGAGGGGGATTTTGGGTGGGAATTTACTCAAGAAGGGAAAAACTTATACAATGGATTCTATCTTATCCATGGGTTGGGAAAGCTCTGCTATGGCTTCCTTTGGACATCACAAAAGCTTATTCTTATTTGGCTATGGTGAAAGGGAGTACTGGATTGGCAATTAGGCTCAGTGAGCAGGGTGATGTTTTGGAAATTTTTGAAGATAGAAGTAGGAATAGAGGGAGGTCTATTAGTGAAGTGGAGGAAAGAGATGGAGTGTTGTGGGTGGGATCCATAAATGGGCCCTTTGCTGCTAAGTATAAAACTGTTGCAAGTGTTGTGGATCACGATCCTCTTGGGTGA 1560 0.4603 MVMYLGSVGKGEEEDLGSQHDGGEGDKAATKGWMRINVCVAVGNVITTIVVFLLVGNKSMTSSMATLATMEEIIFGKRRFLHRCNHGASSCLSLLLGISVFEVRNKTNFGTSSRLRILTTLPFHRLPYTMRSHSQLHLTAFVTVLVTAWFACNRSFESSDNDSAAFFGATEVWQYEAVPIESGAVGPESFAFGPGGEGPYTGVSDGQIIKWHHPQKRWLSFAVTSSNRDDKCGGPYEEHPKREHICGRPLGLCFNMQSGELYVADAYMGLVVVEPNGGTATKITSHVDGEPLAFTNSLDIDQRTGVVYFTSSSSKYERRNYVSLILSGEKTGKLMKYEPQSQQVSVLLSNLTFANGVALSKDGDYILIVETTNCRVLKYWLETPKAGTLEVFADLPGFPDNIKRSLRGGFWVGIYSRREKLIQWILSYPWVGKALLWLPLDITKAYSYLAMVKGSTGLAIRLSEQGDVLEIFEDRSRNRGRSISEVEERDGVLWVGSINGPFAAKYKTVASVVDHDPLG* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1358 519 MobiDBLite consensus disorder prediction 1 24 - -
Lja1g1358 519 Pfam Strictosidine synthase 296 383 IPR018119 GO:0009058|GO:0016844
Lja1g1358 519 SUPERFAMILY Calcium-dependent phosphotriesterase 167 501 - -
Lja1g1358 519 Pfam Strictosidine synthase-like, N-terminal 176 211 - -
Lja1g1358 519 PANTHER STRICTOSIDINE SYNTHASE-RELATED 138 503 - -
Lja1g1358 519 Gene3D - 170 515 IPR011042 -
Lja1g1358 519 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 2 138 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1358 Lja-Chr1 14365179 14372928 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1358 - - mtr:MTR_7g090320 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1358 1 14365179 14372928 Lja1g1358 1 14365179 14372928 ECH